Protein–RNA interactions for Protein: Q8K1J5

Sde2, Replication stress response regulator SDE2, mousemouse

Known RBP Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sde2Q8K1J5 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sde2Q8K1J5 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
Sde2Q8K1J5 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sde2Q8K1J5 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sde2Q8K1J5 Gm6018-201ENSMUST00000216090 1306 ntBASIC18.66■□□□□ 0.58
Sde2Q8K1J5 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.66■□□□□ 0.58
Sde2Q8K1J5 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sde2Q8K1J5 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sde2Q8K1J5 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sde2Q8K1J5 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sde2Q8K1J5 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC18.65■□□□□ 0.58
Sde2Q8K1J5 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sde2Q8K1J5 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sde2Q8K1J5 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sde2Q8K1J5 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Sde2Q8K1J5 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sde2Q8K1J5 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Sde2Q8K1J5 Gm12017-201ENSMUST00000122453 1003 ntBASIC18.65■□□□□ 0.58
Sde2Q8K1J5 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC18.65■□□□□ 0.58
Sde2Q8K1J5 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC18.65■□□□□ 0.58
Sde2Q8K1J5 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC18.65■□□□□ 0.58
Sde2Q8K1J5 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sde2Q8K1J5 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Sde2Q8K1J5 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC18.65■□□□□ 0.58
Sde2Q8K1J5 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sde2Q8K1J5 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sde2Q8K1J5 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Sde2Q8K1J5 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Sde2Q8K1J5 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC18.64■□□□□ 0.58
Sde2Q8K1J5 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Sde2Q8K1J5 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sde2Q8K1J5 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sde2Q8K1J5 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sde2Q8K1J5 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
Sde2Q8K1J5 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sde2Q8K1J5 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Sde2Q8K1J5 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC18.64■□□□□ 0.57
Sde2Q8K1J5 AC131187.1-201ENSMUST00000224567 809 ntBASIC18.64■□□□□ 0.57
Sde2Q8K1J5 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sde2Q8K1J5 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC18.64■□□□□ 0.57
Sde2Q8K1J5 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Sde2Q8K1J5 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Sde2Q8K1J5 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sde2Q8K1J5 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sde2Q8K1J5 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sde2Q8K1J5 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC18.63■□□□□ 0.57
Sde2Q8K1J5 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sde2Q8K1J5 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Sde2Q8K1J5 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Sde2Q8K1J5 Gm22175-201ENSMUST00000175007 78 ntBASIC18.63■□□□□ 0.57
Sde2Q8K1J5 Gm7774-201ENSMUST00000200064 533 ntBASIC18.63■□□□□ 0.57
Sde2Q8K1J5 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Sde2Q8K1J5 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC18.63■□□□□ 0.57
Sde2Q8K1J5 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sde2Q8K1J5 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sde2Q8K1J5 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Sde2Q8K1J5 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sde2Q8K1J5 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sde2Q8K1J5 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sde2Q8K1J5 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sde2Q8K1J5 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sde2Q8K1J5 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Sde2Q8K1J5 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sde2Q8K1J5 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Sde2Q8K1J5 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sde2Q8K1J5 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sde2Q8K1J5 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Sde2Q8K1J5 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sde2Q8K1J5 Gm22065-201ENSMUST00000103753 110 ntBASIC18.62■□□□□ 0.57
Sde2Q8K1J5 Gm22066-201ENSMUST00000103761 110 ntBASIC18.62■□□□□ 0.57
Sde2Q8K1J5 Gm24932-201ENSMUST00000103763 110 ntBASIC18.62■□□□□ 0.57
Sde2Q8K1J5 Gm24115-201ENSMUST00000103799 110 ntBASIC18.62■□□□□ 0.57
Sde2Q8K1J5 Gm22190-201ENSMUST00000103827 110 ntBASIC18.62■□□□□ 0.57
Sde2Q8K1J5 Gm22191-201ENSMUST00000103831 110 ntBASIC18.62■□□□□ 0.57
Sde2Q8K1J5 Gm24721-201ENSMUST00000103849 110 ntBASIC18.62■□□□□ 0.57
Sde2Q8K1J5 Gm28018-201ENSMUST00000103869 110 ntBASIC18.62■□□□□ 0.57
Sde2Q8K1J5 Gm26399-201ENSMUST00000103937 110 ntBASIC18.62■□□□□ 0.57
Sde2Q8K1J5 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Sde2Q8K1J5 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sde2Q8K1J5 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Sde2Q8K1J5 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
Sde2Q8K1J5 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC18.62■□□□□ 0.57
Sde2Q8K1J5 Gm25349-201ENSMUST00000177728 110 ntBASIC18.62■□□□□ 0.57
Sde2Q8K1J5 Gm23616-201ENSMUST00000177797 110 ntBASIC18.62■□□□□ 0.57
Sde2Q8K1J5 Gm25871-201ENSMUST00000177816 110 ntBASIC18.62■□□□□ 0.57
Sde2Q8K1J5 Gm24752-201ENSMUST00000178240 110 ntBASIC18.62■□□□□ 0.57
Sde2Q8K1J5 Gm24496-201ENSMUST00000178287 110 ntBASIC18.62■□□□□ 0.57
Sde2Q8K1J5 Gm25649-201ENSMUST00000178476 110 ntBASIC18.62■□□□□ 0.57
Sde2Q8K1J5 Gm25548-201ENSMUST00000178681 110 ntBASIC18.62■□□□□ 0.57
Sde2Q8K1J5 Gm23147-201ENSMUST00000178841 110 ntBASIC18.62■□□□□ 0.57
Sde2Q8K1J5 Gm26095-201ENSMUST00000179270 110 ntBASIC18.62■□□□□ 0.57
Sde2Q8K1J5 Gm22171-201ENSMUST00000179283 110 ntBASIC18.62■□□□□ 0.57
Sde2Q8K1J5 Gm23936-201ENSMUST00000179354 110 ntBASIC18.62■□□□□ 0.57
Sde2Q8K1J5 Gm22619-201ENSMUST00000179516 110 ntBASIC18.62■□□□□ 0.57
Sde2Q8K1J5 Gm25255-201ENSMUST00000179579 110 ntBASIC18.62■□□□□ 0.57
Sde2Q8K1J5 Gm24755-201ENSMUST00000179691 110 ntBASIC18.62■□□□□ 0.57
Sde2Q8K1J5 Gm26506-201ENSMUST00000179692 110 ntBASIC18.62■□□□□ 0.57
Sde2Q8K1J5 Gm25086-201ENSMUST00000179931 110 ntBASIC18.62■□□□□ 0.57
Sde2Q8K1J5 Gm23243-201ENSMUST00000180047 110 ntBASIC18.62■□□□□ 0.57
Sde2Q8K1J5 Gm24659-201ENSMUST00000180212 110 ntBASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms