Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rtn1Q8K0T0 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rtn1Q8K0T0 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rtn1Q8K0T0 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rtn1Q8K0T0 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Rtn1Q8K0T0 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC17.87■□□□□ 0.45
Rtn1Q8K0T0 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rtn1Q8K0T0 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rtn1Q8K0T0 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rtn1Q8K0T0 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rtn1Q8K0T0 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rtn1Q8K0T0 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rtn1Q8K0T0 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rtn1Q8K0T0 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rtn1Q8K0T0 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rtn1Q8K0T0 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rtn1Q8K0T0 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rtn1Q8K0T0 Gm2308-201ENSMUST00000166539 1004 ntBASIC17.86■□□□□ 0.45
Rtn1Q8K0T0 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC17.86■□□□□ 0.45
Rtn1Q8K0T0 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC17.86■□□□□ 0.45
Rtn1Q8K0T0 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rtn1Q8K0T0 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rtn1Q8K0T0 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rtn1Q8K0T0 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rtn1Q8K0T0 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Rtn1Q8K0T0 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rtn1Q8K0T0 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
Rtn1Q8K0T0 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rtn1Q8K0T0 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC17.86■□□□□ 0.45
Rtn1Q8K0T0 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rtn1Q8K0T0 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rtn1Q8K0T0 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rtn1Q8K0T0 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rtn1Q8K0T0 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Rtn1Q8K0T0 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rtn1Q8K0T0 Gm10060-201ENSMUST00000212002 111 ntBASIC17.85■□□□□ 0.45
Rtn1Q8K0T0 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rtn1Q8K0T0 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rtn1Q8K0T0 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
Rtn1Q8K0T0 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Rtn1Q8K0T0 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rtn1Q8K0T0 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rtn1Q8K0T0 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rtn1Q8K0T0 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rtn1Q8K0T0 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rtn1Q8K0T0 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rtn1Q8K0T0 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rtn1Q8K0T0 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Rtn1Q8K0T0 Gm7222-201ENSMUST00000117512 906 ntBASIC17.84■□□□□ 0.45
Rtn1Q8K0T0 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Rtn1Q8K0T0 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC17.84■□□□□ 0.45
Rtn1Q8K0T0 Gm5682-201ENSMUST00000173402 505 ntBASIC17.84■□□□□ 0.45
Rtn1Q8K0T0 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Rtn1Q8K0T0 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rtn1Q8K0T0 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.84■□□□□ 0.45
Rtn1Q8K0T0 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rtn1Q8K0T0 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rtn1Q8K0T0 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC17.84■□□□□ 0.45
Rtn1Q8K0T0 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rtn1Q8K0T0 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rtn1Q8K0T0 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rtn1Q8K0T0 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC17.84■□□□□ 0.45
Rtn1Q8K0T0 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
Rtn1Q8K0T0 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Rtn1Q8K0T0 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC17.83■□□□□ 0.45
Rtn1Q8K0T0 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Rtn1Q8K0T0 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rtn1Q8K0T0 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rtn1Q8K0T0 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rtn1Q8K0T0 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rtn1Q8K0T0 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Rtn1Q8K0T0 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rtn1Q8K0T0 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rtn1Q8K0T0 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rtn1Q8K0T0 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rtn1Q8K0T0 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rtn1Q8K0T0 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Rtn1Q8K0T0 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rtn1Q8K0T0 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Rtn1Q8K0T0 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Rtn1Q8K0T0 Gm6550-201ENSMUST00000187574 993 ntBASIC17.83■□□□□ 0.44
Rtn1Q8K0T0 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC17.83■□□□□ 0.44
Rtn1Q8K0T0 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rtn1Q8K0T0 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Rtn1Q8K0T0 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rtn1Q8K0T0 Gm7461-201ENSMUST00000058918 827 ntBASIC17.83■□□□□ 0.44
Rtn1Q8K0T0 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rtn1Q8K0T0 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rtn1Q8K0T0 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rtn1Q8K0T0 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rtn1Q8K0T0 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Rtn1Q8K0T0 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rtn1Q8K0T0 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Rtn1Q8K0T0 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Rtn1Q8K0T0 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rtn1Q8K0T0 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Rtn1Q8K0T0 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Rtn1Q8K0T0 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rtn1Q8K0T0 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rtn1Q8K0T0 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms