Protein–RNA interactions for Protein: Q8JZK9

Hmgcs1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs1Q8JZK9 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Hmgcs1Q8JZK9 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC14.81□□□□□ -0.04
Hmgcs1Q8JZK9 AC127349.1-201ENSMUST00000224590 266 ntBASIC14.81□□□□□ -0.04
Hmgcs1Q8JZK9 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hmgcs1Q8JZK9 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hmgcs1Q8JZK9 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hmgcs1Q8JZK9 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hmgcs1Q8JZK9 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hmgcs1Q8JZK9 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hmgcs1Q8JZK9 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Hmgcs1Q8JZK9 Grk6-207ENSMUST00000225925 2769 ntBASIC14.81□□□□□ -0.04
Hmgcs1Q8JZK9 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hmgcs1Q8JZK9 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hmgcs1Q8JZK9 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
Hmgcs1Q8JZK9 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.81□□□□□ -0.04
Hmgcs1Q8JZK9 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hmgcs1Q8JZK9 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hmgcs1Q8JZK9 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Hmgcs1Q8JZK9 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hmgcs1Q8JZK9 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hmgcs1Q8JZK9 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hmgcs1Q8JZK9 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hmgcs1Q8JZK9 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Hmgcs1Q8JZK9 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.8□□□□□ -0.04
Hmgcs1Q8JZK9 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hmgcs1Q8JZK9 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.8□□□□□ -0.04
Hmgcs1Q8JZK9 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hmgcs1Q8JZK9 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
Hmgcs1Q8JZK9 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC14.8□□□□□ -0.04
Hmgcs1Q8JZK9 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Hmgcs1Q8JZK9 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC14.8□□□□□ -0.04
Hmgcs1Q8JZK9 Rprl3-201ENSMUST00000157400 290 ntBASIC14.8□□□□□ -0.04
Hmgcs1Q8JZK9 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Hmgcs1Q8JZK9 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Hmgcs1Q8JZK9 Gm44454-201ENSMUST00000198541 138 ntBASIC14.8□□□□□ -0.04
Hmgcs1Q8JZK9 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hmgcs1Q8JZK9 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hmgcs1Q8JZK9 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Hmgcs1Q8JZK9 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hmgcs1Q8JZK9 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hmgcs1Q8JZK9 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hmgcs1Q8JZK9 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Hmgcs1Q8JZK9 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hmgcs1Q8JZK9 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Hmgcs1Q8JZK9 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hmgcs1Q8JZK9 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hmgcs1Q8JZK9 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hmgcs1Q8JZK9 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Hmgcs1Q8JZK9 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Hmgcs1Q8JZK9 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.8□□□□□ -0.04
Hmgcs1Q8JZK9 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
Hmgcs1Q8JZK9 Gm4609-201ENSMUST00000106443 1002 ntBASIC14.79□□□□□ -0.04
Hmgcs1Q8JZK9 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hmgcs1Q8JZK9 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hmgcs1Q8JZK9 Gm5138-201ENSMUST00000113842 1002 ntBASIC14.79□□□□□ -0.04
Hmgcs1Q8JZK9 Gm15191-201ENSMUST00000117933 1000 ntBASIC14.79□□□□□ -0.04
Hmgcs1Q8JZK9 Gm12182-201ENSMUST00000118655 1008 ntBASIC14.79□□□□□ -0.04
Hmgcs1Q8JZK9 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.79□□□□□ -0.04
Hmgcs1Q8JZK9 Gm10284-201ENSMUST00000145057 1005 ntBASIC14.79□□□□□ -0.04
Hmgcs1Q8JZK9 Gm10481-201ENSMUST00000179228 1002 ntBASIC14.79□□□□□ -0.04
Hmgcs1Q8JZK9 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14.79□□□□□ -0.04
Hmgcs1Q8JZK9 Gm2574-201ENSMUST00000181051 1002 ntBASIC14.79□□□□□ -0.04
Hmgcs1Q8JZK9 Gm3200-201ENSMUST00000181493 1002 ntBASIC14.79□□□□□ -0.04
Hmgcs1Q8JZK9 Gm8825-201ENSMUST00000182565 998 ntBASIC14.79□□□□□ -0.04
Hmgcs1Q8JZK9 Gm4518-201ENSMUST00000182638 718 ntBASIC14.79□□□□□ -0.04
Hmgcs1Q8JZK9 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.79□□□□□ -0.04
Hmgcs1Q8JZK9 Gm4575-201ENSMUST00000182991 1002 ntBASIC14.79□□□□□ -0.04
Hmgcs1Q8JZK9 Gm8709-201ENSMUST00000183230 1012 ntBASIC14.79□□□□□ -0.04
Hmgcs1Q8JZK9 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC14.79□□□□□ -0.04
Hmgcs1Q8JZK9 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hmgcs1Q8JZK9 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.79□□□□□ -0.04
Hmgcs1Q8JZK9 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC14.79□□□□□ -0.04
Hmgcs1Q8JZK9 Gm8784-201ENSMUST00000222096 1435 ntBASIC14.79□□□□□ -0.04
Hmgcs1Q8JZK9 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Hmgcs1Q8JZK9 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC14.79□□□□□ -0.04
Hmgcs1Q8JZK9 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hmgcs1Q8JZK9 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hmgcs1Q8JZK9 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hmgcs1Q8JZK9 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hmgcs1Q8JZK9 Gm10293-201ENSMUST00000076317 1002 ntBASIC14.79□□□□□ -0.04
Hmgcs1Q8JZK9 Gm6316-201ENSMUST00000082064 1020 ntBASIC14.79□□□□□ -0.04
Hmgcs1Q8JZK9 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hmgcs1Q8JZK9 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
Hmgcs1Q8JZK9 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hmgcs1Q8JZK9 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hmgcs1Q8JZK9 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hmgcs1Q8JZK9 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hmgcs1Q8JZK9 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Hmgcs1Q8JZK9 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.78□□□□□ -0.04
Hmgcs1Q8JZK9 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Hmgcs1Q8JZK9 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hmgcs1Q8JZK9 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hmgcs1Q8JZK9 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hmgcs1Q8JZK9 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hmgcs1Q8JZK9 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Hmgcs1Q8JZK9 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hmgcs1Q8JZK9 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hmgcs1Q8JZK9 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
Hmgcs1Q8JZK9 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hmgcs1Q8JZK9 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms