Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC15.9■□□□□ 0.14
Rp1l1Q8CGM2 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Rp1l1Q8CGM2 Gm29310-201ENSMUST00000185468 696 ntBASIC15.9■□□□□ 0.14
Rp1l1Q8CGM2 Gm21825-201ENSMUST00000185728 696 ntBASIC15.9■□□□□ 0.14
Rp1l1Q8CGM2 Gm29109-201ENSMUST00000185895 696 ntBASIC15.9■□□□□ 0.14
Rp1l1Q8CGM2 Gm21896-201ENSMUST00000186520 696 ntBASIC15.9■□□□□ 0.14
Rp1l1Q8CGM2 Gm21873-201ENSMUST00000186728 696 ntBASIC15.9■□□□□ 0.14
Rp1l1Q8CGM2 Gm21794-201ENSMUST00000187056 696 ntBASIC15.9■□□□□ 0.14
Rp1l1Q8CGM2 Gm21880-201ENSMUST00000187275 696 ntBASIC15.9■□□□□ 0.14
Rp1l1Q8CGM2 Gm21826-201ENSMUST00000187451 696 ntBASIC15.9■□□□□ 0.14
Rp1l1Q8CGM2 Gm21198-201ENSMUST00000188393 696 ntBASIC15.9■□□□□ 0.14
Rp1l1Q8CGM2 Gm21749-201ENSMUST00000189343 696 ntBASIC15.9■□□□□ 0.14
Rp1l1Q8CGM2 Gm21901-201ENSMUST00000189568 696 ntBASIC15.9■□□□□ 0.14
Rp1l1Q8CGM2 Gm29424-201ENSMUST00000189716 696 ntBASIC15.9■□□□□ 0.14
Rp1l1Q8CGM2 Gm28599-201ENSMUST00000189838 694 ntBASIC15.9■□□□□ 0.14
Rp1l1Q8CGM2 Gm21867-201ENSMUST00000189917 696 ntBASIC15.9■□□□□ 0.14
Rp1l1Q8CGM2 Gm29269-201ENSMUST00000190087 696 ntBASIC15.9■□□□□ 0.14
Rp1l1Q8CGM2 Gm21722-201ENSMUST00000190153 696 ntBASIC15.9■□□□□ 0.14
Rp1l1Q8CGM2 Gm28423-201ENSMUST00000190701 696 ntBASIC15.9■□□□□ 0.14
Rp1l1Q8CGM2 Gm21899-201ENSMUST00000190745 696 ntBASIC15.9■□□□□ 0.14
Rp1l1Q8CGM2 Gm21910-201ENSMUST00000191163 696 ntBASIC15.9■□□□□ 0.14
Rp1l1Q8CGM2 Gm21849-201ENSMUST00000191571 696 ntBASIC15.9■□□□□ 0.14
Rp1l1Q8CGM2 Gm28678-201ENSMUST00000191593 696 ntBASIC15.9■□□□□ 0.14
Rp1l1Q8CGM2 Gm20910-201ENSMUST00000193268 696 ntBASIC15.9■□□□□ 0.14
Rp1l1Q8CGM2 Gm21871-201ENSMUST00000194621 696 ntBASIC15.9■□□□□ 0.14
Rp1l1Q8CGM2 Gm6745-201ENSMUST00000199216 526 ntBASIC15.9■□□□□ 0.14
Rp1l1Q8CGM2 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Rp1l1Q8CGM2 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Rp1l1Q8CGM2 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rp1l1Q8CGM2 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Rp1l1Q8CGM2 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rp1l1Q8CGM2 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Rp1l1Q8CGM2 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rp1l1Q8CGM2 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC15.89■□□□□ 0.14
Rp1l1Q8CGM2 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Rp1l1Q8CGM2 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Rp1l1Q8CGM2 Ldb3-207ENSMUST00000227819 1499 ntBASIC15.89■□□□□ 0.13
Rp1l1Q8CGM2 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Rp1l1Q8CGM2 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
Rp1l1Q8CGM2 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rp1l1Q8CGM2 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rp1l1Q8CGM2 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC15.89■□□□□ 0.13
Rp1l1Q8CGM2 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Rp1l1Q8CGM2 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Rp1l1Q8CGM2 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Rp1l1Q8CGM2 Gm9899-201ENSMUST00000065519 555 ntBASIC15.89■□□□□ 0.13
Rp1l1Q8CGM2 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Rp1l1Q8CGM2 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rp1l1Q8CGM2 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Rp1l1Q8CGM2 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rp1l1Q8CGM2 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rp1l1Q8CGM2 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rp1l1Q8CGM2 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rp1l1Q8CGM2 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC15.88■□□□□ 0.13
Rp1l1Q8CGM2 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Rp1l1Q8CGM2 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rp1l1Q8CGM2 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rp1l1Q8CGM2 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Rp1l1Q8CGM2 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC15.88■□□□□ 0.13
Rp1l1Q8CGM2 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rp1l1Q8CGM2 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rp1l1Q8CGM2 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rp1l1Q8CGM2 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rp1l1Q8CGM2 Gm5320-201ENSMUST00000207163 1519 ntBASIC15.88■□□□□ 0.13
Rp1l1Q8CGM2 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Rp1l1Q8CGM2 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC15.88■□□□□ 0.13
Rp1l1Q8CGM2 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC15.88■□□□□ 0.13
Rp1l1Q8CGM2 AC164567.1-201ENSMUST00000219185 960 ntBASIC15.88■□□□□ 0.13
Rp1l1Q8CGM2 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rp1l1Q8CGM2 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Rp1l1Q8CGM2 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Rp1l1Q8CGM2 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC15.88■□□□□ 0.13
Rp1l1Q8CGM2 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rp1l1Q8CGM2 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Rp1l1Q8CGM2 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rp1l1Q8CGM2 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rp1l1Q8CGM2 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rp1l1Q8CGM2 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Rp1l1Q8CGM2 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rp1l1Q8CGM2 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rp1l1Q8CGM2 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rp1l1Q8CGM2 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC15.87■□□□□ 0.13
Rp1l1Q8CGM2 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rp1l1Q8CGM2 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Rp1l1Q8CGM2 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Rp1l1Q8CGM2 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Rp1l1Q8CGM2 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Rp1l1Q8CGM2 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rp1l1Q8CGM2 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC15.87■□□□□ 0.13
Rp1l1Q8CGM2 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rp1l1Q8CGM2 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Rp1l1Q8CGM2 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rp1l1Q8CGM2 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rp1l1Q8CGM2 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rp1l1Q8CGM2 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Rp1l1Q8CGM2 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Rp1l1Q8CGM2 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rp1l1Q8CGM2 Gm18018-201ENSMUST00000198273 408 ntBASIC15.86■□□□□ 0.13
Rp1l1Q8CGM2 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC15.86■□□□□ 0.13
Rp1l1Q8CGM2 Gm45668-201ENSMUST00000211271 493 ntBASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms