Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rbm28Q8CGC6 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rbm28Q8CGC6 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rbm28Q8CGC6 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Rbm28Q8CGC6 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rbm28Q8CGC6 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rbm28Q8CGC6 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rbm28Q8CGC6 Gm11873-201ENSMUST00000117877 1304 ntBASIC18.3■□□□□ 0.52
Rbm28Q8CGC6 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Rbm28Q8CGC6 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rbm28Q8CGC6 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC18.3■□□□□ 0.52
Rbm28Q8CGC6 Gm27702-201ENSMUST00000184512 56 ntBASIC18.3■□□□□ 0.52
Rbm28Q8CGC6 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC18.3■□□□□ 0.52
Rbm28Q8CGC6 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rbm28Q8CGC6 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC18.3■□□□□ 0.52
Rbm28Q8CGC6 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rbm28Q8CGC6 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rbm28Q8CGC6 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rbm28Q8CGC6 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rbm28Q8CGC6 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC18.3■□□□□ 0.52
Rbm28Q8CGC6 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rbm28Q8CGC6 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rbm28Q8CGC6 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rbm28Q8CGC6 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rbm28Q8CGC6 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC18.3■□□□□ 0.52
Rbm28Q8CGC6 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC18.29■□□□□ 0.52
Rbm28Q8CGC6 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Rbm28Q8CGC6 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rbm28Q8CGC6 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rbm28Q8CGC6 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rbm28Q8CGC6 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
Rbm28Q8CGC6 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rbm28Q8CGC6 Gm15358-201ENSMUST00000119249 520 ntBASIC18.29■□□□□ 0.52
Rbm28Q8CGC6 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rbm28Q8CGC6 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC18.29■□□□□ 0.52
Rbm28Q8CGC6 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC18.29■□□□□ 0.52
Rbm28Q8CGC6 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rbm28Q8CGC6 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC18.29■□□□□ 0.52
Rbm28Q8CGC6 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rbm28Q8CGC6 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rbm28Q8CGC6 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rbm28Q8CGC6 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rbm28Q8CGC6 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rbm28Q8CGC6 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rbm28Q8CGC6 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rbm28Q8CGC6 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rbm28Q8CGC6 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rbm28Q8CGC6 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rbm28Q8CGC6 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rbm28Q8CGC6 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC18.29■□□□□ 0.52
Rbm28Q8CGC6 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rbm28Q8CGC6 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Rbm28Q8CGC6 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rbm28Q8CGC6 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
Rbm28Q8CGC6 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rbm28Q8CGC6 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rbm28Q8CGC6 AC153526.5-201ENSMUST00000218661 2147 ntBASIC18.28■□□□□ 0.52
Rbm28Q8CGC6 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rbm28Q8CGC6 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rbm28Q8CGC6 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rbm28Q8CGC6 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rbm28Q8CGC6 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rbm28Q8CGC6 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rbm28Q8CGC6 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rbm28Q8CGC6 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Rbm28Q8CGC6 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rbm28Q8CGC6 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rbm28Q8CGC6 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rbm28Q8CGC6 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Rbm28Q8CGC6 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rbm28Q8CGC6 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rbm28Q8CGC6 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Rbm28Q8CGC6 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rbm28Q8CGC6 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Rbm28Q8CGC6 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rbm28Q8CGC6 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rbm28Q8CGC6 Gm4995-201ENSMUST00000117247 432 ntBASIC18.27■□□□□ 0.52
Rbm28Q8CGC6 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC18.27■□□□□ 0.52
Rbm28Q8CGC6 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC18.27■□□□□ 0.52
Rbm28Q8CGC6 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC18.27■□□□□ 0.52
Rbm28Q8CGC6 Gm2756-201ENSMUST00000195851 400 ntBASIC18.27■□□□□ 0.52
Rbm28Q8CGC6 Gm45167-201ENSMUST00000208007 322 ntBASIC18.27■□□□□ 0.52
Rbm28Q8CGC6 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rbm28Q8CGC6 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC18.27■□□□□ 0.52
Rbm28Q8CGC6 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rbm28Q8CGC6 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
Rbm28Q8CGC6 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Rbm28Q8CGC6 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rbm28Q8CGC6 Gm38327-201ENSMUST00000195852 1755 ntBASIC18.27■□□□□ 0.51
Rbm28Q8CGC6 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rbm28Q8CGC6 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rbm28Q8CGC6 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rbm28Q8CGC6 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rbm28Q8CGC6 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rbm28Q8CGC6 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rbm28Q8CGC6 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Rbm28Q8CGC6 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rbm28Q8CGC6 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rbm28Q8CGC6 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rbm28Q8CGC6 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms