Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Gm6736-201ENSMUST00000166583 948 ntBASIC19.06■□□□□ 0.64
Smc4Q8CG47 Mir7036b-201ENSMUST00000184791 63 ntBASIC19.06■□□□□ 0.64
Smc4Q8CG47 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC19.06■□□□□ 0.64
Smc4Q8CG47 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Smc4Q8CG47 Gm7229-201ENSMUST00000214719 1007 ntBASIC19.06■□□□□ 0.64
Smc4Q8CG47 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smc4Q8CG47 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smc4Q8CG47 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smc4Q8CG47 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smc4Q8CG47 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smc4Q8CG47 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smc4Q8CG47 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smc4Q8CG47 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smc4Q8CG47 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Smc4Q8CG47 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC19.06■□□□□ 0.64
Smc4Q8CG47 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smc4Q8CG47 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC19.05■□□□□ 0.64
Smc4Q8CG47 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smc4Q8CG47 Gm13294-201ENSMUST00000121757 1330 ntBASIC19.05■□□□□ 0.64
Smc4Q8CG47 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Smc4Q8CG47 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Smc4Q8CG47 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smc4Q8CG47 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smc4Q8CG47 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC19.05■□□□□ 0.64
Smc4Q8CG47 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Smc4Q8CG47 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC19.05■□□□□ 0.64
Smc4Q8CG47 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC19.05■□□□□ 0.64
Smc4Q8CG47 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC19.05■□□□□ 0.64
Smc4Q8CG47 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC19.05■□□□□ 0.64
Smc4Q8CG47 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Smc4Q8CG47 Gm24513-201ENSMUST00000174964 138 ntBASIC19.05■□□□□ 0.64
Smc4Q8CG47 Gm27397-201ENSMUST00000184997 107 ntBASIC19.05■□□□□ 0.64
Smc4Q8CG47 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Smc4Q8CG47 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smc4Q8CG47 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smc4Q8CG47 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smc4Q8CG47 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smc4Q8CG47 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smc4Q8CG47 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smc4Q8CG47 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Smc4Q8CG47 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smc4Q8CG47 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smc4Q8CG47 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smc4Q8CG47 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Smc4Q8CG47 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smc4Q8CG47 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smc4Q8CG47 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smc4Q8CG47 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smc4Q8CG47 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smc4Q8CG47 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Smc4Q8CG47 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smc4Q8CG47 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Smc4Q8CG47 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smc4Q8CG47 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC19.04■□□□□ 0.64
Smc4Q8CG47 Gm44945-201ENSMUST00000206764 1187 ntBASIC19.04■□□□□ 0.64
Smc4Q8CG47 Bloc1s5-203ENSMUST00000224902 612 ntBASIC19.04■□□□□ 0.64
Smc4Q8CG47 AC225888.1-201ENSMUST00000227184 728 ntBASIC19.04■□□□□ 0.64
Smc4Q8CG47 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smc4Q8CG47 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smc4Q8CG47 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Smc4Q8CG47 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smc4Q8CG47 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC19.04■□□□□ 0.64
Smc4Q8CG47 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smc4Q8CG47 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smc4Q8CG47 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Smc4Q8CG47 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC19.04■□□□□ 0.64
Smc4Q8CG47 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smc4Q8CG47 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smc4Q8CG47 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smc4Q8CG47 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Smc4Q8CG47 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Smc4Q8CG47 Gm19430-201ENSMUST00000193847 2137 ntBASIC19.03■□□□□ 0.64
Smc4Q8CG47 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smc4Q8CG47 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smc4Q8CG47 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smc4Q8CG47 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smc4Q8CG47 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smc4Q8CG47 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Smc4Q8CG47 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smc4Q8CG47 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smc4Q8CG47 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC19.03■□□□□ 0.64
Smc4Q8CG47 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Smc4Q8CG47 Gm17271-201ENSMUST00000165535 355 ntBASIC19.03■□□□□ 0.64
Smc4Q8CG47 Gm27702-201ENSMUST00000184512 56 ntBASIC19.03■□□□□ 0.64
Smc4Q8CG47 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Smc4Q8CG47 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC19.03■□□□□ 0.64
Smc4Q8CG47 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC19.03■□□□□ 0.64
Smc4Q8CG47 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC19.03■□□□□ 0.64
Smc4Q8CG47 AC159295.1-201ENSMUST00000225326 940 ntBASIC19.03■□□□□ 0.64
Smc4Q8CG47 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC19.03■□□□□ 0.64
Smc4Q8CG47 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smc4Q8CG47 Gm10175-201ENSMUST00000086013 645 ntBASIC19.03■□□□□ 0.64
Smc4Q8CG47 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smc4Q8CG47 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smc4Q8CG47 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smc4Q8CG47 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smc4Q8CG47 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Smc4Q8CG47 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smc4Q8CG47 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Smc4Q8CG47 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms