Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Smc5Q8CG46 Gm10676-201ENSMUST00000098778 3221 ntBASIC19.17■□□□□ 0.66
Smc5Q8CG46 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smc5Q8CG46 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smc5Q8CG46 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Smc5Q8CG46 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smc5Q8CG46 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smc5Q8CG46 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Smc5Q8CG46 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC19.17■□□□□ 0.66
Smc5Q8CG46 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smc5Q8CG46 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Smc5Q8CG46 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Smc5Q8CG46 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smc5Q8CG46 Gm44454-201ENSMUST00000198541 138 ntBASIC19.17■□□□□ 0.66
Smc5Q8CG46 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smc5Q8CG46 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC19.17■□□□□ 0.66
Smc5Q8CG46 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC19.17■□□□□ 0.66
Smc5Q8CG46 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smc5Q8CG46 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smc5Q8CG46 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smc5Q8CG46 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smc5Q8CG46 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Smc5Q8CG46 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smc5Q8CG46 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smc5Q8CG46 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Smc5Q8CG46 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Smc5Q8CG46 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Smc5Q8CG46 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smc5Q8CG46 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smc5Q8CG46 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Smc5Q8CG46 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Smc5Q8CG46 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
Smc5Q8CG46 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC19.16■□□□□ 0.66
Smc5Q8CG46 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Smc5Q8CG46 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Smc5Q8CG46 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smc5Q8CG46 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smc5Q8CG46 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smc5Q8CG46 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smc5Q8CG46 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC19.16■□□□□ 0.66
Smc5Q8CG46 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smc5Q8CG46 Gm37305-201ENSMUST00000195714 4279 ntBASIC19.16■□□□□ 0.66
Smc5Q8CG46 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smc5Q8CG46 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smc5Q8CG46 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smc5Q8CG46 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smc5Q8CG46 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smc5Q8CG46 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smc5Q8CG46 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smc5Q8CG46 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smc5Q8CG46 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC19.15■□□□□ 0.66
Smc5Q8CG46 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
Smc5Q8CG46 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smc5Q8CG46 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smc5Q8CG46 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Smc5Q8CG46 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC19.15■□□□□ 0.66
Smc5Q8CG46 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smc5Q8CG46 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smc5Q8CG46 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smc5Q8CG46 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC19.15■□□□□ 0.66
Smc5Q8CG46 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC19.15■□□□□ 0.66
Smc5Q8CG46 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smc5Q8CG46 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC19.15■□□□□ 0.66
Smc5Q8CG46 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC19.15■□□□□ 0.66
Smc5Q8CG46 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smc5Q8CG46 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smc5Q8CG46 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smc5Q8CG46 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smc5Q8CG46 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC19.15■□□□□ 0.66
Smc5Q8CG46 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smc5Q8CG46 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smc5Q8CG46 Gm37912-201ENSMUST00000191895 3076 ntBASIC19.15■□□□□ 0.66
Smc5Q8CG46 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smc5Q8CG46 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Smc5Q8CG46 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.66
Smc5Q8CG46 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Smc5Q8CG46 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smc5Q8CG46 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smc5Q8CG46 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smc5Q8CG46 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Smc5Q8CG46 Rprl3-201ENSMUST00000157400 290 ntBASIC19.14■□□□□ 0.65
Smc5Q8CG46 Gm25016-201ENSMUST00000158399 131 ntBASIC19.14■□□□□ 0.65
Smc5Q8CG46 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Smc5Q8CG46 Gm19164-201ENSMUST00000210667 640 ntBASIC19.14■□□□□ 0.65
Smc5Q8CG46 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smc5Q8CG46 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smc5Q8CG46 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smc5Q8CG46 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smc5Q8CG46 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smc5Q8CG46 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Smc5Q8CG46 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smc5Q8CG46 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smc5Q8CG46 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Smc5Q8CG46 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smc5Q8CG46 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Smc5Q8CG46 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Smc5Q8CG46 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smc5Q8CG46 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Smc5Q8CG46 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smc5Q8CG46 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms