Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc28aQ8CEI3 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc28aQ8CEI3 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc28aQ8CEI3 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc28aQ8CEI3 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC16.35■□□□□ 0.21
Ccdc28aQ8CEI3 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC16.35■□□□□ 0.21
Ccdc28aQ8CEI3 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc28aQ8CEI3 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Ccdc28aQ8CEI3 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc28aQ8CEI3 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc28aQ8CEI3 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc28aQ8CEI3 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc28aQ8CEI3 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
Ccdc28aQ8CEI3 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC16.35■□□□□ 0.21
Ccdc28aQ8CEI3 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc28aQ8CEI3 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc28aQ8CEI3 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc28aQ8CEI3 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc28aQ8CEI3 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc28aQ8CEI3 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Ccdc28aQ8CEI3 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Ccdc28aQ8CEI3 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc28aQ8CEI3 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc28aQ8CEI3 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc28aQ8CEI3 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc28aQ8CEI3 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc28aQ8CEI3 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Ccdc28aQ8CEI3 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc28aQ8CEI3 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc28aQ8CEI3 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc28aQ8CEI3 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc28aQ8CEI3 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Ccdc28aQ8CEI3 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC16.34■□□□□ 0.21
Ccdc28aQ8CEI3 Gm18032-201ENSMUST00000222541 538 ntBASIC16.34■□□□□ 0.21
Ccdc28aQ8CEI3 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc28aQ8CEI3 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Ccdc28aQ8CEI3 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc28aQ8CEI3 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Ccdc28aQ8CEI3 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc28aQ8CEI3 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc28aQ8CEI3 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
Ccdc28aQ8CEI3 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc28aQ8CEI3 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc28aQ8CEI3 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ccdc28aQ8CEI3 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Ccdc28aQ8CEI3 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Ccdc28aQ8CEI3 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC16.33■□□□□ 0.21
Ccdc28aQ8CEI3 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ccdc28aQ8CEI3 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Ccdc28aQ8CEI3 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc28aQ8CEI3 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc28aQ8CEI3 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Ccdc28aQ8CEI3 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc28aQ8CEI3 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc28aQ8CEI3 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC16.33■□□□□ 0.2
Ccdc28aQ8CEI3 AC130713.1-201ENSMUST00000228853 1096 ntBASIC16.33■□□□□ 0.2
Ccdc28aQ8CEI3 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc28aQ8CEI3 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc28aQ8CEI3 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc28aQ8CEI3 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc28aQ8CEI3 Gm37736-201ENSMUST00000193564 2802 ntBASIC16.33■□□□□ 0.2
Ccdc28aQ8CEI3 Gm11960-202ENSMUST00000181063 2858 ntBASIC16.33■□□□□ 0.2
Ccdc28aQ8CEI3 Gm38058-201ENSMUST00000194323 4368 ntBASIC16.33■□□□□ 0.2
Ccdc28aQ8CEI3 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc28aQ8CEI3 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC16.33■□□□□ 0.2
Ccdc28aQ8CEI3 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc28aQ8CEI3 Gm43352-201ENSMUST00000196419 3065 ntBASIC16.33■□□□□ 0.2
Ccdc28aQ8CEI3 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc28aQ8CEI3 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc28aQ8CEI3 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Ccdc28aQ8CEI3 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc28aQ8CEI3 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc28aQ8CEI3 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
Ccdc28aQ8CEI3 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc28aQ8CEI3 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc28aQ8CEI3 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc28aQ8CEI3 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc28aQ8CEI3 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc28aQ8CEI3 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc28aQ8CEI3 Gm9013-201ENSMUST00000132939 882 ntBASIC16.32■□□□□ 0.2
Ccdc28aQ8CEI3 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
Ccdc28aQ8CEI3 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC16.32■□□□□ 0.2
Ccdc28aQ8CEI3 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Ccdc28aQ8CEI3 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC16.32■□□□□ 0.2
Ccdc28aQ8CEI3 Gm6623-201ENSMUST00000173570 544 ntBASIC16.32■□□□□ 0.2
Ccdc28aQ8CEI3 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC16.32■□□□□ 0.2
Ccdc28aQ8CEI3 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Ccdc28aQ8CEI3 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Ccdc28aQ8CEI3 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc28aQ8CEI3 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc28aQ8CEI3 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc28aQ8CEI3 Gm16425-201ENSMUST00000118143 3130 ntBASIC16.32■□□□□ 0.2
Ccdc28aQ8CEI3 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc28aQ8CEI3 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc28aQ8CEI3 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc28aQ8CEI3 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc28aQ8CEI3 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC16.31■□□□□ 0.2
Ccdc28aQ8CEI3 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC16.31■□□□□ 0.2
Ccdc28aQ8CEI3 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC16.31■□□□□ 0.2
Ccdc28aQ8CEI3 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms