Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vcpip1Q8CDG3 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
Vcpip1Q8CDG3 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.65■□□□□ 0.26
Vcpip1Q8CDG3 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.65■□□□□ 0.26
Vcpip1Q8CDG3 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vcpip1Q8CDG3 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vcpip1Q8CDG3 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vcpip1Q8CDG3 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Vcpip1Q8CDG3 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vcpip1Q8CDG3 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vcpip1Q8CDG3 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vcpip1Q8CDG3 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Vcpip1Q8CDG3 Gm8784-201ENSMUST00000222096 1435 ntBASIC16.64■□□□□ 0.25
Vcpip1Q8CDG3 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vcpip1Q8CDG3 Gm45133-201ENSMUST00000207548 2773 ntBASIC16.64■□□□□ 0.25
Vcpip1Q8CDG3 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vcpip1Q8CDG3 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC16.64■□□□□ 0.25
Vcpip1Q8CDG3 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
Vcpip1Q8CDG3 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Vcpip1Q8CDG3 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC16.64■□□□□ 0.25
Vcpip1Q8CDG3 Gm44454-201ENSMUST00000198541 138 ntBASIC16.64■□□□□ 0.25
Vcpip1Q8CDG3 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC16.64■□□□□ 0.25
Vcpip1Q8CDG3 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Vcpip1Q8CDG3 Mzt1-203ENSMUST00000227948 952 ntBASIC16.64■□□□□ 0.25
Vcpip1Q8CDG3 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vcpip1Q8CDG3 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Vcpip1Q8CDG3 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Vcpip1Q8CDG3 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
Vcpip1Q8CDG3 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vcpip1Q8CDG3 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
Vcpip1Q8CDG3 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vcpip1Q8CDG3 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Vcpip1Q8CDG3 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vcpip1Q8CDG3 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vcpip1Q8CDG3 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vcpip1Q8CDG3 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vcpip1Q8CDG3 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vcpip1Q8CDG3 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vcpip1Q8CDG3 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vcpip1Q8CDG3 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vcpip1Q8CDG3 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vcpip1Q8CDG3 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Vcpip1Q8CDG3 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Vcpip1Q8CDG3 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Vcpip1Q8CDG3 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Vcpip1Q8CDG3 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Vcpip1Q8CDG3 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vcpip1Q8CDG3 Gm13034-201ENSMUST00000121342 3177 ntBASIC16.63■□□□□ 0.25
Vcpip1Q8CDG3 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC16.63■□□□□ 0.25
Vcpip1Q8CDG3 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vcpip1Q8CDG3 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vcpip1Q8CDG3 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Vcpip1Q8CDG3 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vcpip1Q8CDG3 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vcpip1Q8CDG3 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Vcpip1Q8CDG3 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Vcpip1Q8CDG3 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC16.63■□□□□ 0.25
Vcpip1Q8CDG3 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC16.63■□□□□ 0.25
Vcpip1Q8CDG3 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC16.63■□□□□ 0.25
Vcpip1Q8CDG3 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vcpip1Q8CDG3 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.63■□□□□ 0.25
Vcpip1Q8CDG3 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vcpip1Q8CDG3 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Vcpip1Q8CDG3 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Vcpip1Q8CDG3 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vcpip1Q8CDG3 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Vcpip1Q8CDG3 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vcpip1Q8CDG3 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vcpip1Q8CDG3 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vcpip1Q8CDG3 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Vcpip1Q8CDG3 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vcpip1Q8CDG3 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Vcpip1Q8CDG3 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vcpip1Q8CDG3 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vcpip1Q8CDG3 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vcpip1Q8CDG3 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Vcpip1Q8CDG3 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vcpip1Q8CDG3 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vcpip1Q8CDG3 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vcpip1Q8CDG3 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Vcpip1Q8CDG3 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vcpip1Q8CDG3 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vcpip1Q8CDG3 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Vcpip1Q8CDG3 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Vcpip1Q8CDG3 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Vcpip1Q8CDG3 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vcpip1Q8CDG3 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC16.62■□□□□ 0.25
Vcpip1Q8CDG3 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Vcpip1Q8CDG3 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vcpip1Q8CDG3 Gm43352-201ENSMUST00000196419 3065 ntBASIC16.61■□□□□ 0.25
Vcpip1Q8CDG3 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Vcpip1Q8CDG3 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vcpip1Q8CDG3 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vcpip1Q8CDG3 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vcpip1Q8CDG3 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC16.61■□□□□ 0.25
Vcpip1Q8CDG3 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Vcpip1Q8CDG3 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Vcpip1Q8CDG3 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.61■□□□□ 0.25
Vcpip1Q8CDG3 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC16.61■□□□□ 0.25
Vcpip1Q8CDG3 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms