Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Shisa4Q8CA71 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Shisa4Q8CA71 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Shisa4Q8CA71 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Shisa4Q8CA71 Gm11839-201ENSMUST00000120647 1953 ntBASIC17.93■□□□□ 0.46
Shisa4Q8CA71 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Shisa4Q8CA71 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Shisa4Q8CA71 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC17.93■□□□□ 0.46
Shisa4Q8CA71 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Shisa4Q8CA71 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Shisa4Q8CA71 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Shisa4Q8CA71 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Shisa4Q8CA71 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Shisa4Q8CA71 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Shisa4Q8CA71 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Shisa4Q8CA71 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Shisa4Q8CA71 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Shisa4Q8CA71 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Shisa4Q8CA71 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Shisa4Q8CA71 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Shisa4Q8CA71 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Shisa4Q8CA71 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC17.92■□□□□ 0.46
Shisa4Q8CA71 Gm9727-201ENSMUST00000161387 555 ntBASIC17.92■□□□□ 0.46
Shisa4Q8CA71 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Shisa4Q8CA71 AC225888.1-201ENSMUST00000227184 728 ntBASIC17.92■□□□□ 0.46
Shisa4Q8CA71 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Shisa4Q8CA71 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Shisa4Q8CA71 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Shisa4Q8CA71 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Shisa4Q8CA71 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Shisa4Q8CA71 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Shisa4Q8CA71 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Shisa4Q8CA71 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Shisa4Q8CA71 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC17.91■□□□□ 0.46
Shisa4Q8CA71 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC17.91■□□□□ 0.46
Shisa4Q8CA71 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Shisa4Q8CA71 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Shisa4Q8CA71 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Shisa4Q8CA71 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Shisa4Q8CA71 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Shisa4Q8CA71 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Shisa4Q8CA71 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Shisa4Q8CA71 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Shisa4Q8CA71 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Shisa4Q8CA71 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Shisa4Q8CA71 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Shisa4Q8CA71 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
Shisa4Q8CA71 Gm12260-201ENSMUST00000122447 411 ntBASIC17.91■□□□□ 0.46
Shisa4Q8CA71 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Shisa4Q8CA71 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC17.91■□□□□ 0.46
Shisa4Q8CA71 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC17.91■□□□□ 0.46
Shisa4Q8CA71 Gm7556-201ENSMUST00000201178 1084 ntBASIC17.91■□□□□ 0.46
Shisa4Q8CA71 Gm7229-201ENSMUST00000214719 1007 ntBASIC17.91■□□□□ 0.46
Shisa4Q8CA71 Gm5186-201ENSMUST00000218781 920 ntBASIC17.91■□□□□ 0.46
Shisa4Q8CA71 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC17.91■□□□□ 0.46
Shisa4Q8CA71 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC17.91■□□□□ 0.46
Shisa4Q8CA71 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC17.91■□□□□ 0.46
Shisa4Q8CA71 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Shisa4Q8CA71 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Shisa4Q8CA71 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Shisa4Q8CA71 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Shisa4Q8CA71 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Shisa4Q8CA71 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.91■□□□□ 0.46
Shisa4Q8CA71 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Shisa4Q8CA71 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Shisa4Q8CA71 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Shisa4Q8CA71 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Shisa4Q8CA71 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shisa4Q8CA71 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Shisa4Q8CA71 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shisa4Q8CA71 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shisa4Q8CA71 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shisa4Q8CA71 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shisa4Q8CA71 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shisa4Q8CA71 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shisa4Q8CA71 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Shisa4Q8CA71 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shisa4Q8CA71 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shisa4Q8CA71 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shisa4Q8CA71 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Shisa4Q8CA71 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shisa4Q8CA71 Gm14822-201ENSMUST00000122247 291 ntBASIC17.9■□□□□ 0.46
Shisa4Q8CA71 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
Shisa4Q8CA71 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC17.9■□□□□ 0.46
Shisa4Q8CA71 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC17.9■□□□□ 0.46
Shisa4Q8CA71 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Shisa4Q8CA71 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Shisa4Q8CA71 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shisa4Q8CA71 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shisa4Q8CA71 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shisa4Q8CA71 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shisa4Q8CA71 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
Shisa4Q8CA71 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shisa4Q8CA71 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Shisa4Q8CA71 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shisa4Q8CA71 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Shisa4Q8CA71 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Shisa4Q8CA71 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC17.9■□□□□ 0.46
Shisa4Q8CA71 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC17.9■□□□□ 0.46
Shisa4Q8CA71 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms