Protein–RNA interactions for Protein: Q8C6M1

Usp20, Ubiquitin carboxyl-terminal hydrolase 20, mousemouse

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp20Q8C6M1 Gm18489-201ENSMUST00000172565 551 ntBASIC17.11■□□□□ 0.33
Usp20Q8C6M1 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Usp20Q8C6M1 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp20Q8C6M1 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Usp20Q8C6M1 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp20Q8C6M1 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC17.11■□□□□ 0.33
Usp20Q8C6M1 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp20Q8C6M1 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Usp20Q8C6M1 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Usp20Q8C6M1 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp20Q8C6M1 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp20Q8C6M1 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp20Q8C6M1 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Usp20Q8C6M1 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp20Q8C6M1 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp20Q8C6M1 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC17.11■□□□□ 0.33
Usp20Q8C6M1 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Usp20Q8C6M1 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp20Q8C6M1 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Usp20Q8C6M1 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp20Q8C6M1 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp20Q8C6M1 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp20Q8C6M1 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp20Q8C6M1 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp20Q8C6M1 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Usp20Q8C6M1 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp20Q8C6M1 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp20Q8C6M1 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp20Q8C6M1 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Usp20Q8C6M1 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Usp20Q8C6M1 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC17.1■□□□□ 0.33
Usp20Q8C6M1 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC17.1■□□□□ 0.33
Usp20Q8C6M1 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Usp20Q8C6M1 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
Usp20Q8C6M1 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp20Q8C6M1 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp20Q8C6M1 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp20Q8C6M1 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp20Q8C6M1 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp20Q8C6M1 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Usp20Q8C6M1 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp20Q8C6M1 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp20Q8C6M1 Rbfox2-206ENSMUST00000227314 1810 ntBASIC17.1■□□□□ 0.33
Usp20Q8C6M1 AC153526.5-201ENSMUST00000218661 2147 ntBASIC17.09■□□□□ 0.33
Usp20Q8C6M1 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC17.09■□□□□ 0.33
Usp20Q8C6M1 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp20Q8C6M1 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp20Q8C6M1 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp20Q8C6M1 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp20Q8C6M1 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Usp20Q8C6M1 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Usp20Q8C6M1 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp20Q8C6M1 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp20Q8C6M1 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC17.09■□□□□ 0.33
Usp20Q8C6M1 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Usp20Q8C6M1 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Usp20Q8C6M1 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp20Q8C6M1 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp20Q8C6M1 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Usp20Q8C6M1 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp20Q8C6M1 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Usp20Q8C6M1 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp20Q8C6M1 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp20Q8C6M1 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp20Q8C6M1 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Usp20Q8C6M1 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Usp20Q8C6M1 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Usp20Q8C6M1 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Usp20Q8C6M1 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Usp20Q8C6M1 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Usp20Q8C6M1 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Usp20Q8C6M1 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Usp20Q8C6M1 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Usp20Q8C6M1 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC17.08■□□□□ 0.33
Usp20Q8C6M1 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Usp20Q8C6M1 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC17.08■□□□□ 0.33
Usp20Q8C6M1 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC17.08■□□□□ 0.32
Usp20Q8C6M1 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Usp20Q8C6M1 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Usp20Q8C6M1 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Usp20Q8C6M1 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
Usp20Q8C6M1 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Usp20Q8C6M1 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC17.08■□□□□ 0.32
Usp20Q8C6M1 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Usp20Q8C6M1 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Usp20Q8C6M1 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Usp20Q8C6M1 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
Usp20Q8C6M1 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Usp20Q8C6M1 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Usp20Q8C6M1 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Usp20Q8C6M1 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp20Q8C6M1 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp20Q8C6M1 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Usp20Q8C6M1 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp20Q8C6M1 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp20Q8C6M1 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp20Q8C6M1 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp20Q8C6M1 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
Usp20Q8C6M1 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp20Q8C6M1 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms