Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rft1Q8C3B8 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rft1Q8C3B8 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rft1Q8C3B8 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rft1Q8C3B8 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rft1Q8C3B8 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rft1Q8C3B8 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Rft1Q8C3B8 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rft1Q8C3B8 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rft1Q8C3B8 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rft1Q8C3B8 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rft1Q8C3B8 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rft1Q8C3B8 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rft1Q8C3B8 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Rft1Q8C3B8 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rft1Q8C3B8 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rft1Q8C3B8 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Rft1Q8C3B8 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rft1Q8C3B8 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
Rft1Q8C3B8 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rft1Q8C3B8 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC13.85□□□□□ -0.19
Rft1Q8C3B8 AC130713.1-201ENSMUST00000228853 1096 ntBASIC13.85□□□□□ -0.19
Rft1Q8C3B8 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rft1Q8C3B8 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Rft1Q8C3B8 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Rft1Q8C3B8 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC13.85□□□□□ -0.19
Rft1Q8C3B8 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rft1Q8C3B8 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rft1Q8C3B8 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rft1Q8C3B8 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rft1Q8C3B8 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rft1Q8C3B8 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rft1Q8C3B8 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rft1Q8C3B8 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rft1Q8C3B8 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC13.85□□□□□ -0.19
Rft1Q8C3B8 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rft1Q8C3B8 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rft1Q8C3B8 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.85□□□□□ -0.19
Rft1Q8C3B8 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rft1Q8C3B8 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rft1Q8C3B8 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rft1Q8C3B8 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rft1Q8C3B8 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rft1Q8C3B8 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rft1Q8C3B8 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rft1Q8C3B8 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rft1Q8C3B8 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rft1Q8C3B8 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rft1Q8C3B8 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rft1Q8C3B8 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC13.84□□□□□ -0.19
Rft1Q8C3B8 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rft1Q8C3B8 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rft1Q8C3B8 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rft1Q8C3B8 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rft1Q8C3B8 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rft1Q8C3B8 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rft1Q8C3B8 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rft1Q8C3B8 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rft1Q8C3B8 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC13.84□□□□□ -0.19
Rft1Q8C3B8 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rft1Q8C3B8 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rft1Q8C3B8 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC13.84□□□□□ -0.19
Rft1Q8C3B8 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rft1Q8C3B8 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Rft1Q8C3B8 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rft1Q8C3B8 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rft1Q8C3B8 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rft1Q8C3B8 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Rft1Q8C3B8 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rft1Q8C3B8 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rft1Q8C3B8 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rft1Q8C3B8 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC13.84□□□□□ -0.19
Rft1Q8C3B8 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Rft1Q8C3B8 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Rft1Q8C3B8 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Rft1Q8C3B8 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rft1Q8C3B8 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rft1Q8C3B8 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rft1Q8C3B8 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rft1Q8C3B8 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Rft1Q8C3B8 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rft1Q8C3B8 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rft1Q8C3B8 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC13.83□□□□□ -0.2
Rft1Q8C3B8 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rft1Q8C3B8 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rft1Q8C3B8 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rft1Q8C3B8 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rft1Q8C3B8 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rft1Q8C3B8 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rft1Q8C3B8 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rft1Q8C3B8 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Rft1Q8C3B8 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rft1Q8C3B8 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC13.83□□□□□ -0.2
Rft1Q8C3B8 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC13.83□□□□□ -0.2
Rft1Q8C3B8 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rft1Q8C3B8 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rft1Q8C3B8 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rft1Q8C3B8 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rft1Q8C3B8 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Rft1Q8C3B8 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms