Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC13□□□□□ -0.33
Smim4Q8C1Q6 Gm13312-201ENSMUST00000119631 718 ntBASIC13□□□□□ -0.33
Smim4Q8C1Q6 AC121577.1-201ENSMUST00000227302 707 ntBASIC13□□□□□ -0.33
Smim4Q8C1Q6 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Smim4Q8C1Q6 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC13□□□□□ -0.33
Smim4Q8C1Q6 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC13□□□□□ -0.33
Smim4Q8C1Q6 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC13□□□□□ -0.33
Smim4Q8C1Q6 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smim4Q8C1Q6 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smim4Q8C1Q6 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Smim4Q8C1Q6 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smim4Q8C1Q6 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Smim4Q8C1Q6 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Smim4Q8C1Q6 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC13□□□□□ -0.33
Smim4Q8C1Q6 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC13□□□□□ -0.33
Smim4Q8C1Q6 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Smim4Q8C1Q6 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13□□□□□ -0.33
Smim4Q8C1Q6 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC13□□□□□ -0.33
Smim4Q8C1Q6 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smim4Q8C1Q6 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
Smim4Q8C1Q6 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Smim4Q8C1Q6 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Smim4Q8C1Q6 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smim4Q8C1Q6 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC12.99□□□□□ -0.33
Smim4Q8C1Q6 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Smim4Q8C1Q6 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC12.99□□□□□ -0.33
Smim4Q8C1Q6 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smim4Q8C1Q6 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smim4Q8C1Q6 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smim4Q8C1Q6 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Smim4Q8C1Q6 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Smim4Q8C1Q6 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smim4Q8C1Q6 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smim4Q8C1Q6 Gm25406-201ENSMUST00000157599 105 ntBASIC12.99□□□□□ -0.33
Smim4Q8C1Q6 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC12.99□□□□□ -0.33
Smim4Q8C1Q6 Gm29518-201ENSMUST00000190858 372 ntBASIC12.99□□□□□ -0.33
Smim4Q8C1Q6 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smim4Q8C1Q6 AC127302.2-201ENSMUST00000215212 268 ntBASIC12.99□□□□□ -0.33
Smim4Q8C1Q6 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC12.99□□□□□ -0.33
Smim4Q8C1Q6 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smim4Q8C1Q6 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smim4Q8C1Q6 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smim4Q8C1Q6 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smim4Q8C1Q6 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Smim4Q8C1Q6 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smim4Q8C1Q6 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smim4Q8C1Q6 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smim4Q8C1Q6 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Smim4Q8C1Q6 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smim4Q8C1Q6 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smim4Q8C1Q6 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Smim4Q8C1Q6 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smim4Q8C1Q6 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smim4Q8C1Q6 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smim4Q8C1Q6 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smim4Q8C1Q6 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Smim4Q8C1Q6 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Smim4Q8C1Q6 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Smim4Q8C1Q6 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Smim4Q8C1Q6 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smim4Q8C1Q6 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smim4Q8C1Q6 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Smim4Q8C1Q6 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC12.98□□□□□ -0.33
Smim4Q8C1Q6 Rprl3-201ENSMUST00000157400 290 ntBASIC12.98□□□□□ -0.33
Smim4Q8C1Q6 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Smim4Q8C1Q6 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Smim4Q8C1Q6 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smim4Q8C1Q6 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC12.98□□□□□ -0.33
Smim4Q8C1Q6 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC12.98□□□□□ -0.33
Smim4Q8C1Q6 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smim4Q8C1Q6 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smim4Q8C1Q6 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smim4Q8C1Q6 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smim4Q8C1Q6 Gm7669-201ENSMUST00000210184 1603 ntBASIC12.98□□□□□ -0.33
Smim4Q8C1Q6 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smim4Q8C1Q6 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Smim4Q8C1Q6 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smim4Q8C1Q6 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smim4Q8C1Q6 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smim4Q8C1Q6 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smim4Q8C1Q6 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smim4Q8C1Q6 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Smim4Q8C1Q6 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC12.97□□□□□ -0.33
Smim4Q8C1Q6 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Smim4Q8C1Q6 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Smim4Q8C1Q6 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smim4Q8C1Q6 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smim4Q8C1Q6 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Smim4Q8C1Q6 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC12.97□□□□□ -0.33
Smim4Q8C1Q6 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smim4Q8C1Q6 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smim4Q8C1Q6 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Smim4Q8C1Q6 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
Smim4Q8C1Q6 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smim4Q8C1Q6 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smim4Q8C1Q6 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Smim4Q8C1Q6 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smim4Q8C1Q6 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC12.97□□□□□ -0.33
Smim4Q8C1Q6 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smim4Q8C1Q6 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms