Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Trim35Q8C006 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim35Q8C006 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim35Q8C006 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim35Q8C006 A530053G22Rik-205ENSMUST00000205153 1448 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trim35Q8C006 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim35Q8C006 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim35Q8C006 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Trim35Q8C006 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Trim35Q8C006 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trim35Q8C006 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Trim35Q8C006 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trim35Q8C006 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trim35Q8C006 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trim35Q8C006 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trim35Q8C006 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim35Q8C006 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trim35Q8C006 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
Trim35Q8C006 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim35Q8C006 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Trim35Q8C006 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.33■□□□□ 0.2
Trim35Q8C006 Gm18352-201ENSMUST00000189113 902 ntBASIC16.33■□□□□ 0.2
Trim35Q8C006 Gm38384-201ENSMUST00000195413 1122 ntBASIC16.33■□□□□ 0.2
Trim35Q8C006 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
Trim35Q8C006 AC171204.1-201ENSMUST00000215867 975 ntTSL 5 BASIC16.33■□□□□ 0.2
Trim35Q8C006 Gm36525-201ENSMUST00000222590 638 ntTSL 5 BASIC16.33■□□□□ 0.2
Trim35Q8C006 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim35Q8C006 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim35Q8C006 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim35Q8C006 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim35Q8C006 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim35Q8C006 Zfp626-201ENSMUST00000080175 816 ntTSL 5 BASIC16.33■□□□□ 0.2
Trim35Q8C006 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Trim35Q8C006 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim35Q8C006 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim35Q8C006 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trim35Q8C006 Olfr1511-202ENSMUST00000214168 1468 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Trim35Q8C006 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC16.33■□□□□ 0.2
Trim35Q8C006 Gm2721-201ENSMUST00000222380 1571 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trim35Q8C006 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim35Q8C006 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Trim35Q8C006 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trim35Q8C006 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.33■□□□□ 0.2
Trim35Q8C006 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.33■□□□□ 0.2
Trim35Q8C006 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim35Q8C006 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim35Q8C006 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.32■□□□□ 0.2
Trim35Q8C006 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim35Q8C006 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim35Q8C006 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.32■□□□□ 0.2
Trim35Q8C006 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim35Q8C006 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC16.32■□□□□ 0.2
Trim35Q8C006 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim35Q8C006 Gm14906-201ENSMUST00000119265 390 ntBASIC16.32■□□□□ 0.2
Trim35Q8C006 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Trim35Q8C006 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC16.32■□□□□ 0.2
Trim35Q8C006 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trim35Q8C006 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.32■□□□□ 0.2
Trim35Q8C006 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.32■□□□□ 0.2
Trim35Q8C006 Lsm5-203ENSMUST00000176595 274 ntTSL 5 BASIC16.32■□□□□ 0.2
Trim35Q8C006 Gm19585-201ENSMUST00000186007 587 ntTSL 2 BASIC16.32■□□□□ 0.2
Trim35Q8C006 Gm37241-201ENSMUST00000191736 523 ntBASIC16.32■□□□□ 0.2
Trim35Q8C006 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Trim35Q8C006 Pip-202ENSMUST00000203244 736 ntTSL 3 BASIC16.32■□□□□ 0.2
Trim35Q8C006 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trim35Q8C006 Olfr955-203ENSMUST00000220176 1452 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Trim35Q8C006 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
Trim35Q8C006 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim35Q8C006 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim35Q8C006 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim35Q8C006 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim35Q8C006 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim35Q8C006 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trim35Q8C006 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim35Q8C006 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim35Q8C006 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim35Q8C006 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim35Q8C006 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.31■□□□□ 0.2
Trim35Q8C006 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim35Q8C006 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim35Q8C006 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Trim35Q8C006 Gm45263-201ENSMUST00000210377 1375 ntBASIC16.31■□□□□ 0.2
Trim35Q8C006 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trim35Q8C006 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC16.31■□□□□ 0.2
Trim35Q8C006 Olfr757-ps1-201ENSMUST00000172798 413 ntBASIC16.31■□□□□ 0.2
Trim35Q8C006 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim35Q8C006 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Trim35Q8C006 Gm28258-201ENSMUST00000189033 587 ntTSL 3 BASIC16.31■□□□□ 0.2
Trim35Q8C006 Gm21362-201ENSMUST00000194272 928 ntBASIC16.31■□□□□ 0.2
Trim35Q8C006 Gm18748-201ENSMUST00000198507 622 ntBASIC16.31■□□□□ 0.2
Trim35Q8C006 Gm40332-201ENSMUST00000199847 938 ntBASIC16.31■□□□□ 0.2
Trim35Q8C006 Gm17177-202ENSMUST00000222007 990 ntTSL 5 BASIC16.31■□□□□ 0.2
Trim35Q8C006 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Trim35Q8C006 Slxl1-201ENSMUST00000088740 730 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim35Q8C006 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Trim35Q8C006 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim35Q8C006 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.31■□□□□ 0.2
Trim35Q8C006 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Trim35Q8C006 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Trim35Q8C006 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms