Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC12.12□□□□□ -0.47
Chd9Q8BYH8 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chd9Q8BYH8 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC12.12□□□□□ -0.47
Chd9Q8BYH8 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chd9Q8BYH8 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Chd9Q8BYH8 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Chd9Q8BYH8 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Chd9Q8BYH8 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Chd9Q8BYH8 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
Chd9Q8BYH8 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Chd9Q8BYH8 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chd9Q8BYH8 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chd9Q8BYH8 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC12.12□□□□□ -0.47
Chd9Q8BYH8 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chd9Q8BYH8 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chd9Q8BYH8 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chd9Q8BYH8 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chd9Q8BYH8 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chd9Q8BYH8 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chd9Q8BYH8 Gm13226-201ENSMUST00000117838 404 ntBASIC12.12□□□□□ -0.47
Chd9Q8BYH8 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chd9Q8BYH8 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chd9Q8BYH8 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chd9Q8BYH8 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Chd9Q8BYH8 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
Chd9Q8BYH8 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC12.11□□□□□ -0.47
Chd9Q8BYH8 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC12.11□□□□□ -0.47
Chd9Q8BYH8 Gm27838-201ENSMUST00000184829 128 ntBASIC12.11□□□□□ -0.47
Chd9Q8BYH8 Gm45784-201ENSMUST00000188360 142 ntBASIC12.11□□□□□ -0.47
Chd9Q8BYH8 Gm7775-201ENSMUST00000218871 853 ntBASIC12.11□□□□□ -0.47
Chd9Q8BYH8 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chd9Q8BYH8 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Chd9Q8BYH8 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chd9Q8BYH8 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chd9Q8BYH8 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chd9Q8BYH8 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Chd9Q8BYH8 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Chd9Q8BYH8 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chd9Q8BYH8 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chd9Q8BYH8 Gm12134-201ENSMUST00000122109 520 ntBASIC12.11□□□□□ -0.47
Chd9Q8BYH8 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC12.11□□□□□ -0.47
Chd9Q8BYH8 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Chd9Q8BYH8 Gm18489-201ENSMUST00000172565 551 ntBASIC12.11□□□□□ -0.47
Chd9Q8BYH8 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Chd9Q8BYH8 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Chd9Q8BYH8 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC12.11□□□□□ -0.47
Chd9Q8BYH8 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC12.11□□□□□ -0.47
Chd9Q8BYH8 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chd9Q8BYH8 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chd9Q8BYH8 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chd9Q8BYH8 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chd9Q8BYH8 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chd9Q8BYH8 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Chd9Q8BYH8 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chd9Q8BYH8 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chd9Q8BYH8 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chd9Q8BYH8 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chd9Q8BYH8 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chd9Q8BYH8 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chd9Q8BYH8 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Chd9Q8BYH8 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Chd9Q8BYH8 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.1□□□□□ -0.47
Chd9Q8BYH8 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.1□□□□□ -0.47
Chd9Q8BYH8 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chd9Q8BYH8 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC12.1□□□□□ -0.47
Chd9Q8BYH8 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chd9Q8BYH8 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chd9Q8BYH8 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chd9Q8BYH8 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chd9Q8BYH8 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chd9Q8BYH8 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Chd9Q8BYH8 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Chd9Q8BYH8 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chd9Q8BYH8 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Chd9Q8BYH8 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chd9Q8BYH8 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Chd9Q8BYH8 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Chd9Q8BYH8 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Chd9Q8BYH8 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Chd9Q8BYH8 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Chd9Q8BYH8 Gm29541-201ENSMUST00000191351 678 ntBASIC12.1□□□□□ -0.47
Chd9Q8BYH8 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC12.1□□□□□ -0.47
Chd9Q8BYH8 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Chd9Q8BYH8 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC12.1□□□□□ -0.47
Chd9Q8BYH8 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chd9Q8BYH8 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Chd9Q8BYH8 Gm11841-201ENSMUST00000117060 1963 ntBASIC12.1□□□□□ -0.47
Chd9Q8BYH8 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Chd9Q8BYH8 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chd9Q8BYH8 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Chd9Q8BYH8 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chd9Q8BYH8 Gm27892-201ENSMUST00000185017 106 ntBASIC12.09□□□□□ -0.47
Chd9Q8BYH8 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Chd9Q8BYH8 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chd9Q8BYH8 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC12.09□□□□□ -0.47
Chd9Q8BYH8 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Chd9Q8BYH8 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chd9Q8BYH8 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chd9Q8BYH8 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Chd9Q8BYH8 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms