Protein–RNA interactions for Protein: Q8BTV2

Cpsf7, Cleavage and polyadenylation specificity factor subunit 7, mousemouse

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf7Q8BTV2 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC15.54■□□□□ 0.08
Cpsf7Q8BTV2 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cpsf7Q8BTV2 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC15.54■□□□□ 0.08
Cpsf7Q8BTV2 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cpsf7Q8BTV2 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cpsf7Q8BTV2 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cpsf7Q8BTV2 Sybu-209ENSMUST00000228639 4113 ntBASIC15.54■□□□□ 0.08
Cpsf7Q8BTV2 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cpsf7Q8BTV2 Prkcz2-201ENSMUST00000206136 1756 ntBASIC15.54■□□□□ 0.08
Cpsf7Q8BTV2 Gm5049-201ENSMUST00000195878 1590 ntBASIC15.53■□□□□ 0.08
Cpsf7Q8BTV2 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cpsf7Q8BTV2 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cpsf7Q8BTV2 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.53■□□□□ 0.08
Cpsf7Q8BTV2 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cpsf7Q8BTV2 Camk2g-217ENSMUST00000226630 1937 ntBASIC15.53■□□□□ 0.08
Cpsf7Q8BTV2 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cpsf7Q8BTV2 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cpsf7Q8BTV2 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cpsf7Q8BTV2 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Cpsf7Q8BTV2 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cpsf7Q8BTV2 Gm12134-201ENSMUST00000122109 520 ntBASIC15.53■□□□□ 0.08
Cpsf7Q8BTV2 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cpsf7Q8BTV2 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cpsf7Q8BTV2 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cpsf7Q8BTV2 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cpsf7Q8BTV2 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cpsf7Q8BTV2 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cpsf7Q8BTV2 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cpsf7Q8BTV2 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cpsf7Q8BTV2 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cpsf7Q8BTV2 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cpsf7Q8BTV2 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cpsf7Q8BTV2 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Cpsf7Q8BTV2 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cpsf7Q8BTV2 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cpsf7Q8BTV2 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC15.52■□□□□ 0.08
Cpsf7Q8BTV2 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Cpsf7Q8BTV2 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC15.52■□□□□ 0.08
Cpsf7Q8BTV2 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
Cpsf7Q8BTV2 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cpsf7Q8BTV2 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cpsf7Q8BTV2 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cpsf7Q8BTV2 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Cpsf7Q8BTV2 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cpsf7Q8BTV2 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cpsf7Q8BTV2 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cpsf7Q8BTV2 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
Cpsf7Q8BTV2 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC15.52■□□□□ 0.08
Cpsf7Q8BTV2 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cpsf7Q8BTV2 Gm23634-201ENSMUST00000175071 91 ntBASIC15.52■□□□□ 0.08
Cpsf7Q8BTV2 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Cpsf7Q8BTV2 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC15.52■□□□□ 0.08
Cpsf7Q8BTV2 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cpsf7Q8BTV2 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cpsf7Q8BTV2 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cpsf7Q8BTV2 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Cpsf7Q8BTV2 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cpsf7Q8BTV2 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Cpsf7Q8BTV2 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Cpsf7Q8BTV2 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Cpsf7Q8BTV2 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cpsf7Q8BTV2 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cpsf7Q8BTV2 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cpsf7Q8BTV2 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Cpsf7Q8BTV2 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cpsf7Q8BTV2 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC15.51■□□□□ 0.07
Cpsf7Q8BTV2 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cpsf7Q8BTV2 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cpsf7Q8BTV2 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cpsf7Q8BTV2 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cpsf7Q8BTV2 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cpsf7Q8BTV2 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cpsf7Q8BTV2 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cpsf7Q8BTV2 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cpsf7Q8BTV2 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Cpsf7Q8BTV2 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC15.51■□□□□ 0.07
Cpsf7Q8BTV2 Gm37722-201ENSMUST00000193757 208 ntBASIC15.51■□□□□ 0.07
Cpsf7Q8BTV2 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC15.51■□□□□ 0.07
Cpsf7Q8BTV2 Gm30437-201ENSMUST00000206086 1201 ntBASIC15.51■□□□□ 0.07
Cpsf7Q8BTV2 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC15.51■□□□□ 0.07
Cpsf7Q8BTV2 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Cpsf7Q8BTV2 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cpsf7Q8BTV2 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cpsf7Q8BTV2 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cpsf7Q8BTV2 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cpsf7Q8BTV2 Zkscan4-202ENSMUST00000225845 1506 ntBASIC15.51■□□□□ 0.07
Cpsf7Q8BTV2 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cpsf7Q8BTV2 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cpsf7Q8BTV2 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cpsf7Q8BTV2 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cpsf7Q8BTV2 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Cpsf7Q8BTV2 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cpsf7Q8BTV2 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.51■□□□□ 0.07
Cpsf7Q8BTV2 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cpsf7Q8BTV2 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cpsf7Q8BTV2 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cpsf7Q8BTV2 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Cpsf7Q8BTV2 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cpsf7Q8BTV2 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cpsf7Q8BTV2 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms