Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scfd1Q8BRF7 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scfd1Q8BRF7 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.65■□□□□ 0.42
Scfd1Q8BRF7 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Scfd1Q8BRF7 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC17.65■□□□□ 0.42
Scfd1Q8BRF7 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Scfd1Q8BRF7 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Scfd1Q8BRF7 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Scfd1Q8BRF7 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Scfd1Q8BRF7 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC17.64■□□□□ 0.41
Scfd1Q8BRF7 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scfd1Q8BRF7 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Scfd1Q8BRF7 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scfd1Q8BRF7 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scfd1Q8BRF7 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Scfd1Q8BRF7 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC17.64■□□□□ 0.41
Scfd1Q8BRF7 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scfd1Q8BRF7 Gm2272-201ENSMUST00000194903 582 ntBASIC17.64■□□□□ 0.41
Scfd1Q8BRF7 Gm7556-201ENSMUST00000201178 1084 ntBASIC17.64■□□□□ 0.41
Scfd1Q8BRF7 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scfd1Q8BRF7 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scfd1Q8BRF7 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scfd1Q8BRF7 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scfd1Q8BRF7 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scfd1Q8BRF7 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scfd1Q8BRF7 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC17.64■□□□□ 0.41
Scfd1Q8BRF7 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Scfd1Q8BRF7 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scfd1Q8BRF7 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scfd1Q8BRF7 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scfd1Q8BRF7 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scfd1Q8BRF7 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scfd1Q8BRF7 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scfd1Q8BRF7 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC17.63■□□□□ 0.41
Scfd1Q8BRF7 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Scfd1Q8BRF7 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scfd1Q8BRF7 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC17.63■□□□□ 0.41
Scfd1Q8BRF7 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC17.63■□□□□ 0.41
Scfd1Q8BRF7 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scfd1Q8BRF7 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scfd1Q8BRF7 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scfd1Q8BRF7 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC17.63■□□□□ 0.41
Scfd1Q8BRF7 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scfd1Q8BRF7 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scfd1Q8BRF7 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scfd1Q8BRF7 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scfd1Q8BRF7 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scfd1Q8BRF7 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Scfd1Q8BRF7 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scfd1Q8BRF7 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scfd1Q8BRF7 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scfd1Q8BRF7 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scfd1Q8BRF7 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scfd1Q8BRF7 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Scfd1Q8BRF7 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.62■□□□□ 0.41
Scfd1Q8BRF7 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scfd1Q8BRF7 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scfd1Q8BRF7 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scfd1Q8BRF7 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Scfd1Q8BRF7 Gm16198-201ENSMUST00000118766 670 ntBASIC17.62■□□□□ 0.41
Scfd1Q8BRF7 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC17.62■□□□□ 0.41
Scfd1Q8BRF7 AC155252.2-201ENSMUST00000226946 680 ntBASIC17.62■□□□□ 0.41
Scfd1Q8BRF7 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scfd1Q8BRF7 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC17.62■□□□□ 0.41
Scfd1Q8BRF7 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scfd1Q8BRF7 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scfd1Q8BRF7 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scfd1Q8BRF7 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scfd1Q8BRF7 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Scfd1Q8BRF7 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scfd1Q8BRF7 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scfd1Q8BRF7 Nrn1-204ENSMUST00000224323 1779 ntBASIC17.61■□□□□ 0.41
Scfd1Q8BRF7 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC17.61■□□□□ 0.41
Scfd1Q8BRF7 Gm45293-201ENSMUST00000209754 1812 ntBASIC17.61■□□□□ 0.41
Scfd1Q8BRF7 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scfd1Q8BRF7 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scfd1Q8BRF7 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Scfd1Q8BRF7 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Scfd1Q8BRF7 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scfd1Q8BRF7 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scfd1Q8BRF7 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scfd1Q8BRF7 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scfd1Q8BRF7 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Scfd1Q8BRF7 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
Scfd1Q8BRF7 Gm11025-201ENSMUST00000140773 466 ntBASIC17.61■□□□□ 0.41
Scfd1Q8BRF7 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scfd1Q8BRF7 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Scfd1Q8BRF7 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scfd1Q8BRF7 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scfd1Q8BRF7 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scfd1Q8BRF7 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scfd1Q8BRF7 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Scfd1Q8BRF7 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scfd1Q8BRF7 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scfd1Q8BRF7 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scfd1Q8BRF7 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scfd1Q8BRF7 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scfd1Q8BRF7 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Scfd1Q8BRF7 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Scfd1Q8BRF7 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms