Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Smco3Q8BQM7 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smco3Q8BQM7 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smco3Q8BQM7 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smco3Q8BQM7 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Smco3Q8BQM7 Gm12441-201ENSMUST00000121806 588 ntBASIC12.8□□□□□ -0.36
Smco3Q8BQM7 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC12.8□□□□□ -0.36
Smco3Q8BQM7 Gm10698-201ENSMUST00000182663 604 ntBASIC12.8□□□□□ -0.36
Smco3Q8BQM7 Timm23-208ENSMUST00000226683 750 ntBASIC12.8□□□□□ -0.36
Smco3Q8BQM7 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smco3Q8BQM7 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Smco3Q8BQM7 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC12.8□□□□□ -0.36
Smco3Q8BQM7 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smco3Q8BQM7 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smco3Q8BQM7 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smco3Q8BQM7 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Smco3Q8BQM7 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smco3Q8BQM7 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smco3Q8BQM7 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC12.8□□□□□ -0.36
Smco3Q8BQM7 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC12.79□□□□□ -0.36
Smco3Q8BQM7 Gm11960-202ENSMUST00000181063 2858 ntBASIC12.79□□□□□ -0.36
Smco3Q8BQM7 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC12.79□□□□□ -0.36
Smco3Q8BQM7 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smco3Q8BQM7 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smco3Q8BQM7 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Smco3Q8BQM7 Gm38327-201ENSMUST00000195852 1755 ntBASIC12.79□□□□□ -0.36
Smco3Q8BQM7 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Smco3Q8BQM7 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Smco3Q8BQM7 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smco3Q8BQM7 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smco3Q8BQM7 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smco3Q8BQM7 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smco3Q8BQM7 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Smco3Q8BQM7 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Smco3Q8BQM7 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Smco3Q8BQM7 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smco3Q8BQM7 Gm5643-201ENSMUST00000117081 966 ntBASIC12.79□□□□□ -0.36
Smco3Q8BQM7 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Smco3Q8BQM7 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Smco3Q8BQM7 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC12.79□□□□□ -0.36
Smco3Q8BQM7 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smco3Q8BQM7 Gm16042-201ENSMUST00000204813 1247 ntBASIC12.79□□□□□ -0.36
Smco3Q8BQM7 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC12.79□□□□□ -0.36
Smco3Q8BQM7 AC135637.1-201ENSMUST00000227750 365 ntBASIC12.79□□□□□ -0.36
Smco3Q8BQM7 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smco3Q8BQM7 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smco3Q8BQM7 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smco3Q8BQM7 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smco3Q8BQM7 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smco3Q8BQM7 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smco3Q8BQM7 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smco3Q8BQM7 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smco3Q8BQM7 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smco3Q8BQM7 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smco3Q8BQM7 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smco3Q8BQM7 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Smco3Q8BQM7 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC12.79□□□□□ -0.36
Smco3Q8BQM7 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smco3Q8BQM7 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smco3Q8BQM7 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smco3Q8BQM7 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Smco3Q8BQM7 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smco3Q8BQM7 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Smco3Q8BQM7 Gm16425-201ENSMUST00000118143 3130 ntBASIC12.78□□□□□ -0.36
Smco3Q8BQM7 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smco3Q8BQM7 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Smco3Q8BQM7 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC12.78□□□□□ -0.36
Smco3Q8BQM7 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Smco3Q8BQM7 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smco3Q8BQM7 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Smco3Q8BQM7 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Smco3Q8BQM7 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Smco3Q8BQM7 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC12.78□□□□□ -0.36
Smco3Q8BQM7 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smco3Q8BQM7 Gm36967-201ENSMUST00000193814 266 ntBASIC12.78□□□□□ -0.36
Smco3Q8BQM7 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smco3Q8BQM7 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smco3Q8BQM7 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smco3Q8BQM7 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Smco3Q8BQM7 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Smco3Q8BQM7 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smco3Q8BQM7 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Smco3Q8BQM7 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smco3Q8BQM7 Gm43352-201ENSMUST00000196419 3065 ntBASIC12.77□□□□□ -0.36
Smco3Q8BQM7 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Smco3Q8BQM7 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Smco3Q8BQM7 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Smco3Q8BQM7 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC12.77□□□□□ -0.36
Smco3Q8BQM7 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC12.77□□□□□ -0.36
Smco3Q8BQM7 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Smco3Q8BQM7 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Smco3Q8BQM7 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Smco3Q8BQM7 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Smco3Q8BQM7 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.77□□□□□ -0.37
Smco3Q8BQM7 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Smco3Q8BQM7 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Smco3Q8BQM7 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC12.77□□□□□ -0.37
Smco3Q8BQM7 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC12.77□□□□□ -0.37
Smco3Q8BQM7 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Smco3Q8BQM7 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms