Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Gm19164-201ENSMUST00000210667 640 ntBASIC15.77■□□□□ 0.12
Sfr1Q8BP27 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC15.77■□□□□ 0.12
Sfr1Q8BP27 AC161829.1-201ENSMUST00000220298 281 ntBASIC15.77■□□□□ 0.12
Sfr1Q8BP27 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sfr1Q8BP27 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Sfr1Q8BP27 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Sfr1Q8BP27 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Sfr1Q8BP27 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Sfr1Q8BP27 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Sfr1Q8BP27 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Sfr1Q8BP27 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Sfr1Q8BP27 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Sfr1Q8BP27 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Sfr1Q8BP27 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Sfr1Q8BP27 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sfr1Q8BP27 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sfr1Q8BP27 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sfr1Q8BP27 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sfr1Q8BP27 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC15.76■□□□□ 0.11
Sfr1Q8BP27 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
Sfr1Q8BP27 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC15.76■□□□□ 0.11
Sfr1Q8BP27 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Sfr1Q8BP27 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Sfr1Q8BP27 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC15.76■□□□□ 0.11
Sfr1Q8BP27 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Sfr1Q8BP27 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Sfr1Q8BP27 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
Sfr1Q8BP27 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Sfr1Q8BP27 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sfr1Q8BP27 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sfr1Q8BP27 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sfr1Q8BP27 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Sfr1Q8BP27 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sfr1Q8BP27 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sfr1Q8BP27 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Sfr1Q8BP27 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sfr1Q8BP27 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
Sfr1Q8BP27 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC15.75■□□□□ 0.11
Sfr1Q8BP27 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sfr1Q8BP27 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sfr1Q8BP27 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sfr1Q8BP27 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Sfr1Q8BP27 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Sfr1Q8BP27 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC15.75■□□□□ 0.11
Sfr1Q8BP27 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Sfr1Q8BP27 Gm7461-201ENSMUST00000058918 827 ntBASIC15.75■□□□□ 0.11
Sfr1Q8BP27 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Sfr1Q8BP27 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Sfr1Q8BP27 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sfr1Q8BP27 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
Sfr1Q8BP27 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sfr1Q8BP27 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sfr1Q8BP27 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sfr1Q8BP27 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sfr1Q8BP27 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC15.75■□□□□ 0.11
Sfr1Q8BP27 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sfr1Q8BP27 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.75■□□□□ 0.11
Sfr1Q8BP27 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sfr1Q8BP27 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Sfr1Q8BP27 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Sfr1Q8BP27 Gm16011-201ENSMUST00000121567 2662 ntBASIC15.74■□□□□ 0.11
Sfr1Q8BP27 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC15.74■□□□□ 0.11
Sfr1Q8BP27 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Sfr1Q8BP27 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Sfr1Q8BP27 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sfr1Q8BP27 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Sfr1Q8BP27 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sfr1Q8BP27 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC15.74■□□□□ 0.11
Sfr1Q8BP27 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC15.74■□□□□ 0.11
Sfr1Q8BP27 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
Sfr1Q8BP27 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC15.74■□□□□ 0.11
Sfr1Q8BP27 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sfr1Q8BP27 Gm6089-201ENSMUST00000197666 938 ntBASIC15.74■□□□□ 0.11
Sfr1Q8BP27 Mzt1-203ENSMUST00000227948 952 ntBASIC15.74■□□□□ 0.11
Sfr1Q8BP27 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC15.74■□□□□ 0.11
Sfr1Q8BP27 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sfr1Q8BP27 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sfr1Q8BP27 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Sfr1Q8BP27 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sfr1Q8BP27 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Sfr1Q8BP27 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sfr1Q8BP27 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sfr1Q8BP27 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Sfr1Q8BP27 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC15.74■□□□□ 0.11
Sfr1Q8BP27 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sfr1Q8BP27 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sfr1Q8BP27 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sfr1Q8BP27 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Sfr1Q8BP27 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sfr1Q8BP27 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.73■□□□□ 0.11
Sfr1Q8BP27 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Sfr1Q8BP27 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sfr1Q8BP27 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sfr1Q8BP27 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sfr1Q8BP27 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sfr1Q8BP27 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Sfr1Q8BP27 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sfr1Q8BP27 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sfr1Q8BP27 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Sfr1Q8BP27 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms