Protein–RNA interactions for Protein: Q8BJA3

Hmbox1, Homeobox-containing protein 1, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmbox1Q8BJA3 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC15.16■□□□□ 0.02
Hmbox1Q8BJA3 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Hmbox1Q8BJA3 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Hmbox1Q8BJA3 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hmbox1Q8BJA3 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hmbox1Q8BJA3 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC15.16■□□□□ 0.02
Hmbox1Q8BJA3 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hmbox1Q8BJA3 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.16■□□□□ 0.02
Hmbox1Q8BJA3 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Hmbox1Q8BJA3 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hmbox1Q8BJA3 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hmbox1Q8BJA3 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hmbox1Q8BJA3 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hmbox1Q8BJA3 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Hmbox1Q8BJA3 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hmbox1Q8BJA3 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hmbox1Q8BJA3 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hmbox1Q8BJA3 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hmbox1Q8BJA3 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC15.16■□□□□ 0.02
Hmbox1Q8BJA3 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hmbox1Q8BJA3 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hmbox1Q8BJA3 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Hmbox1Q8BJA3 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Hmbox1Q8BJA3 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Hmbox1Q8BJA3 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Hmbox1Q8BJA3 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hmbox1Q8BJA3 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hmbox1Q8BJA3 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hmbox1Q8BJA3 Wnt10b-206ENSMUST00000228546 2709 ntBASIC15.15■□□□□ 0.02
Hmbox1Q8BJA3 Gm25911-201ENSMUST00000157621 56 ntBASIC15.15■□□□□ 0.02
Hmbox1Q8BJA3 Gm44872-201ENSMUST00000207864 420 ntBASIC15.15■□□□□ 0.02
Hmbox1Q8BJA3 AV026068-213ENSMUST00000223675 1171 ntBASIC15.15■□□□□ 0.02
Hmbox1Q8BJA3 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hmbox1Q8BJA3 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hmbox1Q8BJA3 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Hmbox1Q8BJA3 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hmbox1Q8BJA3 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hmbox1Q8BJA3 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hmbox1Q8BJA3 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Hmbox1Q8BJA3 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Hmbox1Q8BJA3 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hmbox1Q8BJA3 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hmbox1Q8BJA3 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hmbox1Q8BJA3 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hmbox1Q8BJA3 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hmbox1Q8BJA3 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.14■□□□□ 0.01
Hmbox1Q8BJA3 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hmbox1Q8BJA3 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hmbox1Q8BJA3 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hmbox1Q8BJA3 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hmbox1Q8BJA3 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Hmbox1Q8BJA3 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hmbox1Q8BJA3 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hmbox1Q8BJA3 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hmbox1Q8BJA3 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hmbox1Q8BJA3 App-207ENSMUST00000227737 2827 ntBASIC15.14■□□□□ 0.01
Hmbox1Q8BJA3 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hmbox1Q8BJA3 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Hmbox1Q8BJA3 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hmbox1Q8BJA3 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hmbox1Q8BJA3 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hmbox1Q8BJA3 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hmbox1Q8BJA3 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hmbox1Q8BJA3 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC15.14■□□□□ 0.01
Hmbox1Q8BJA3 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC15.14■□□□□ 0.01
Hmbox1Q8BJA3 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hmbox1Q8BJA3 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Hmbox1Q8BJA3 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hmbox1Q8BJA3 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hmbox1Q8BJA3 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Hmbox1Q8BJA3 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hmbox1Q8BJA3 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hmbox1Q8BJA3 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Hmbox1Q8BJA3 Zfp264-201ENSMUST00000208656 1563 ntBASIC15.14■□□□□ 0.01
Hmbox1Q8BJA3 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Hmbox1Q8BJA3 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hmbox1Q8BJA3 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hmbox1Q8BJA3 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hmbox1Q8BJA3 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hmbox1Q8BJA3 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Hmbox1Q8BJA3 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Hmbox1Q8BJA3 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Hmbox1Q8BJA3 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hmbox1Q8BJA3 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC15.13■□□□□ 0.01
Hmbox1Q8BJA3 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hmbox1Q8BJA3 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hmbox1Q8BJA3 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hmbox1Q8BJA3 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Hmbox1Q8BJA3 Gm14701-201ENSMUST00000117156 348 ntBASIC15.13■□□□□ 0.01
Hmbox1Q8BJA3 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hmbox1Q8BJA3 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Hmbox1Q8BJA3 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hmbox1Q8BJA3 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Hmbox1Q8BJA3 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hmbox1Q8BJA3 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hmbox1Q8BJA3 Gm4535-201ENSMUST00000182274 558 ntBASIC15.13■□□□□ 0.01
Hmbox1Q8BJA3 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC15.13■□□□□ 0.01
Hmbox1Q8BJA3 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Hmbox1Q8BJA3 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC15.13■□□□□ 0.01
Hmbox1Q8BJA3 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms