Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.84■□□□□ 0.29
Depdc1bQ8BH88 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
Depdc1bQ8BH88 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Depdc1bQ8BH88 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Depdc1bQ8BH88 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Depdc1bQ8BH88 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Depdc1bQ8BH88 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Depdc1bQ8BH88 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Depdc1bQ8BH88 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Depdc1bQ8BH88 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Depdc1bQ8BH88 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Depdc1bQ8BH88 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Depdc1bQ8BH88 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Depdc1bQ8BH88 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Depdc1bQ8BH88 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Depdc1bQ8BH88 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Depdc1bQ8BH88 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Depdc1bQ8BH88 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Depdc1bQ8BH88 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Depdc1bQ8BH88 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC16.83■□□□□ 0.28
Depdc1bQ8BH88 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Depdc1bQ8BH88 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Depdc1bQ8BH88 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Depdc1bQ8BH88 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Depdc1bQ8BH88 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Depdc1bQ8BH88 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
Depdc1bQ8BH88 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.83■□□□□ 0.28
Depdc1bQ8BH88 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC16.83■□□□□ 0.28
Depdc1bQ8BH88 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Depdc1bQ8BH88 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Depdc1bQ8BH88 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Depdc1bQ8BH88 Gm6376-201ENSMUST00000209407 580 ntBASIC16.83■□□□□ 0.28
Depdc1bQ8BH88 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC16.83■□□□□ 0.28
Depdc1bQ8BH88 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Depdc1bQ8BH88 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Depdc1bQ8BH88 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Depdc1bQ8BH88 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Depdc1bQ8BH88 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Depdc1bQ8BH88 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Depdc1bQ8BH88 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Depdc1bQ8BH88 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Depdc1bQ8BH88 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Depdc1bQ8BH88 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Depdc1bQ8BH88 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Depdc1bQ8BH88 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Depdc1bQ8BH88 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Depdc1bQ8BH88 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.83■□□□□ 0.28
Depdc1bQ8BH88 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Depdc1bQ8BH88 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Depdc1bQ8BH88 Gm27528-202ENSMUST00000222916 2012 ntBASIC16.82■□□□□ 0.28
Depdc1bQ8BH88 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Depdc1bQ8BH88 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Depdc1bQ8BH88 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC16.82■□□□□ 0.28
Depdc1bQ8BH88 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Depdc1bQ8BH88 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Depdc1bQ8BH88 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Depdc1bQ8BH88 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Depdc1bQ8BH88 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Depdc1bQ8BH88 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Depdc1bQ8BH88 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Depdc1bQ8BH88 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Depdc1bQ8BH88 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.82■□□□□ 0.28
Depdc1bQ8BH88 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Depdc1bQ8BH88 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Depdc1bQ8BH88 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Depdc1bQ8BH88 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Depdc1bQ8BH88 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.82■□□□□ 0.28
Depdc1bQ8BH88 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Depdc1bQ8BH88 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Depdc1bQ8BH88 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Depdc1bQ8BH88 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Depdc1bQ8BH88 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Depdc1bQ8BH88 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC16.81■□□□□ 0.28
Depdc1bQ8BH88 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Depdc1bQ8BH88 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Depdc1bQ8BH88 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Depdc1bQ8BH88 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Depdc1bQ8BH88 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC16.81■□□□□ 0.28
Depdc1bQ8BH88 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
Depdc1bQ8BH88 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Depdc1bQ8BH88 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC16.81■□□□□ 0.28
Depdc1bQ8BH88 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Depdc1bQ8BH88 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Depdc1bQ8BH88 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Depdc1bQ8BH88 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Depdc1bQ8BH88 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Depdc1bQ8BH88 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Depdc1bQ8BH88 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Depdc1bQ8BH88 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Depdc1bQ8BH88 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Depdc1bQ8BH88 Asic1-205ENSMUST00000228185 1818 ntBASIC16.8■□□□□ 0.28
Depdc1bQ8BH88 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Depdc1bQ8BH88 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC16.8■□□□□ 0.28
Depdc1bQ8BH88 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Depdc1bQ8BH88 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Depdc1bQ8BH88 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC16.8■□□□□ 0.28
Depdc1bQ8BH88 Gm7862-201ENSMUST00000121461 292 ntBASIC16.8■□□□□ 0.28
Depdc1bQ8BH88 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
Depdc1bQ8BH88 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Depdc1bQ8BH88 AW822252-206ENSMUST00000208904 237 ntBASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms