Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC15.27■□□□□ 0.04
Ubp1Q811S7 Gm7862-201ENSMUST00000121461 292 ntBASIC15.27■□□□□ 0.04
Ubp1Q811S7 AC127302.2-201ENSMUST00000215212 268 ntBASIC15.27■□□□□ 0.04
Ubp1Q811S7 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC15.27■□□□□ 0.04
Ubp1Q811S7 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC15.27■□□□□ 0.04
Ubp1Q811S7 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ubp1Q811S7 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ubp1Q811S7 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Ubp1Q811S7 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ubp1Q811S7 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Ubp1Q811S7 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ubp1Q811S7 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ubp1Q811S7 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ubp1Q811S7 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ubp1Q811S7 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ubp1Q811S7 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ubp1Q811S7 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ubp1Q811S7 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ubp1Q811S7 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ubp1Q811S7 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ubp1Q811S7 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ubp1Q811S7 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ubp1Q811S7 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ubp1Q811S7 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ubp1Q811S7 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ubp1Q811S7 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ubp1Q811S7 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ubp1Q811S7 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ubp1Q811S7 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ubp1Q811S7 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ubp1Q811S7 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ubp1Q811S7 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ubp1Q811S7 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ubp1Q811S7 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ubp1Q811S7 Gm8344-201ENSMUST00000119813 856 ntBASIC15.26■□□□□ 0.03
Ubp1Q811S7 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ubp1Q811S7 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Ubp1Q811S7 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ubp1Q811S7 Gm19164-201ENSMUST00000210667 640 ntBASIC15.26■□□□□ 0.03
Ubp1Q811S7 AC161829.1-201ENSMUST00000220298 281 ntBASIC15.26■□□□□ 0.03
Ubp1Q811S7 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC15.26■□□□□ 0.03
Ubp1Q811S7 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ubp1Q811S7 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ubp1Q811S7 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ubp1Q811S7 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ubp1Q811S7 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
Ubp1Q811S7 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ubp1Q811S7 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC15.26■□□□□ 0.03
Ubp1Q811S7 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Ubp1Q811S7 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ubp1Q811S7 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC15.26■□□□□ 0.03
Ubp1Q811S7 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ubp1Q811S7 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ubp1Q811S7 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ubp1Q811S7 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC15.26■□□□□ 0.03
Ubp1Q811S7 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ubp1Q811S7 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ubp1Q811S7 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ubp1Q811S7 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ubp1Q811S7 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ubp1Q811S7 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ubp1Q811S7 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ubp1Q811S7 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ubp1Q811S7 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ubp1Q811S7 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ubp1Q811S7 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC15.25■□□□□ 0.03
Ubp1Q811S7 Gm15173-201ENSMUST00000122049 433 ntBASIC15.25■□□□□ 0.03
Ubp1Q811S7 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Ubp1Q811S7 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
Ubp1Q811S7 Gm27646-201ENSMUST00000183989 110 ntBASIC15.25■□□□□ 0.03
Ubp1Q811S7 Gm6089-201ENSMUST00000197666 938 ntBASIC15.25■□□□□ 0.03
Ubp1Q811S7 Mzt1-203ENSMUST00000227948 952 ntBASIC15.25■□□□□ 0.03
Ubp1Q811S7 AC154757.1-201ENSMUST00000228289 336 ntBASIC15.25■□□□□ 0.03
Ubp1Q811S7 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Ubp1Q811S7 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ubp1Q811S7 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ubp1Q811S7 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ubp1Q811S7 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ubp1Q811S7 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ubp1Q811S7 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ubp1Q811S7 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ubp1Q811S7 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Ubp1Q811S7 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ubp1Q811S7 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ubp1Q811S7 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ubp1Q811S7 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ubp1Q811S7 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ubp1Q811S7 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ubp1Q811S7 Gm7669-201ENSMUST00000210184 1603 ntBASIC15.25■□□□□ 0.03
Ubp1Q811S7 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ubp1Q811S7 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ubp1Q811S7 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ubp1Q811S7 AC133083.1-201ENSMUST00000221736 2209 ntBASIC15.24■□□□□ 0.03
Ubp1Q811S7 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ubp1Q811S7 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ubp1Q811S7 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ubp1Q811S7 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ubp1Q811S7 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ubp1Q811S7 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.24■□□□□ 0.03
Ubp1Q811S7 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms