Protein–RNA interactions for Protein: Q80XU3

Nucks1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, mousemouse

Known RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nucks1Q80XU3 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.59■□□□□ 0.25
Nucks1Q80XU3 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nucks1Q80XU3 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nucks1Q80XU3 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC16.59■□□□□ 0.25
Nucks1Q80XU3 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.59■□□□□ 0.25
Nucks1Q80XU3 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Nucks1Q80XU3 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Nucks1Q80XU3 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Nucks1Q80XU3 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC16.59■□□□□ 0.25
Nucks1Q80XU3 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC16.59■□□□□ 0.25
Nucks1Q80XU3 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC16.59■□□□□ 0.25
Nucks1Q80XU3 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nucks1Q80XU3 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nucks1Q80XU3 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nucks1Q80XU3 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Nucks1Q80XU3 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Nucks1Q80XU3 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Nucks1Q80XU3 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nucks1Q80XU3 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Nucks1Q80XU3 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nucks1Q80XU3 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC16.58■□□□□ 0.24
Nucks1Q80XU3 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Nucks1Q80XU3 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nucks1Q80XU3 Vti1a-206ENSMUST00000225529 1244 ntBASIC16.58■□□□□ 0.24
Nucks1Q80XU3 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nucks1Q80XU3 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Nucks1Q80XU3 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nucks1Q80XU3 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC16.58■□□□□ 0.24
Nucks1Q80XU3 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nucks1Q80XU3 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
Nucks1Q80XU3 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nucks1Q80XU3 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Nucks1Q80XU3 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nucks1Q80XU3 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC16.58■□□□□ 0.24
Nucks1Q80XU3 BC037039-201ENSMUST00000192003 2205 ntBASIC16.58■□□□□ 0.24
Nucks1Q80XU3 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nucks1Q80XU3 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nucks1Q80XU3 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nucks1Q80XU3 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Nucks1Q80XU3 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nucks1Q80XU3 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nucks1Q80XU3 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nucks1Q80XU3 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Nucks1Q80XU3 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nucks1Q80XU3 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nucks1Q80XU3 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nucks1Q80XU3 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Nucks1Q80XU3 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Nucks1Q80XU3 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Nucks1Q80XU3 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nucks1Q80XU3 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
Nucks1Q80XU3 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nucks1Q80XU3 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC16.57■□□□□ 0.24
Nucks1Q80XU3 Gm15165-201ENSMUST00000118140 502 ntBASIC16.57■□□□□ 0.24
Nucks1Q80XU3 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC16.57■□□□□ 0.24
Nucks1Q80XU3 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC16.57■□□□□ 0.24
Nucks1Q80XU3 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Nucks1Q80XU3 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC16.57■□□□□ 0.24
Nucks1Q80XU3 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nucks1Q80XU3 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nucks1Q80XU3 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nucks1Q80XU3 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nucks1Q80XU3 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
Nucks1Q80XU3 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Nucks1Q80XU3 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nucks1Q80XU3 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nucks1Q80XU3 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nucks1Q80XU3 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nucks1Q80XU3 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nucks1Q80XU3 AC154412.1-201ENSMUST00000226540 2786 ntBASIC16.56■□□□□ 0.24
Nucks1Q80XU3 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Nucks1Q80XU3 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nucks1Q80XU3 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nucks1Q80XU3 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nucks1Q80XU3 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Nucks1Q80XU3 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Nucks1Q80XU3 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nucks1Q80XU3 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nucks1Q80XU3 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nucks1Q80XU3 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Nucks1Q80XU3 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nucks1Q80XU3 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Nucks1Q80XU3 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nucks1Q80XU3 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC16.56■□□□□ 0.24
Nucks1Q80XU3 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC16.56■□□□□ 0.24
Nucks1Q80XU3 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC16.56■□□□□ 0.24
Nucks1Q80XU3 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nucks1Q80XU3 Gm27704-201ENSMUST00000185094 107 ntBASIC16.56■□□□□ 0.24
Nucks1Q80XU3 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
Nucks1Q80XU3 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nucks1Q80XU3 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nucks1Q80XU3 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.56■□□□□ 0.24
Nucks1Q80XU3 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Nucks1Q80XU3 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nucks1Q80XU3 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nucks1Q80XU3 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nucks1Q80XU3 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nucks1Q80XU3 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nucks1Q80XU3 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nucks1Q80XU3 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms