Protein–RNA interactions for Protein: Q80XG9

Lrrtm4, Leucine-rich repeat transmembrane neuronal protein 4, mousemouse

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrtm4Q80XG9 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lrrtm4Q80XG9 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lrrtm4Q80XG9 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Lrrtm4Q80XG9 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lrrtm4Q80XG9 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Lrrtm4Q80XG9 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.07■□□□□ 0
Lrrtm4Q80XG9 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.07■□□□□ 0
Lrrtm4Q80XG9 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lrrtm4Q80XG9 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Lrrtm4Q80XG9 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.07■□□□□ 0
Lrrtm4Q80XG9 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Lrrtm4Q80XG9 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.07■□□□□ 0
Lrrtm4Q80XG9 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.07■□□□□ 0
Lrrtm4Q80XG9 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lrrtm4Q80XG9 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lrrtm4Q80XG9 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Lrrtm4Q80XG9 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Lrrtm4Q80XG9 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Lrrtm4Q80XG9 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC15.06■□□□□ 0
Lrrtm4Q80XG9 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Lrrtm4Q80XG9 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC15.06■□□□□ 0
Lrrtm4Q80XG9 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Lrrtm4Q80XG9 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Lrrtm4Q80XG9 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC15.06■□□□□ 0
Lrrtm4Q80XG9 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Lrrtm4Q80XG9 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC15.06■□□□□ 0
Lrrtm4Q80XG9 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC15.06■□□□□ 0
Lrrtm4Q80XG9 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC15.06■□□□□ 0
Lrrtm4Q80XG9 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC15.06■□□□□ 0
Lrrtm4Q80XG9 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC15.06■□□□□ 0
Lrrtm4Q80XG9 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC15.06■□□□□ 0
Lrrtm4Q80XG9 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC15.06■□□□□ 0
Lrrtm4Q80XG9 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Lrrtm4Q80XG9 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Lrrtm4Q80XG9 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC15.06■□□□□ 0
Lrrtm4Q80XG9 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Lrrtm4Q80XG9 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Lrrtm4Q80XG9 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC15.06■□□□□ 0
Lrrtm4Q80XG9 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Lrrtm4Q80XG9 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC15.06■□□□□ 0
Lrrtm4Q80XG9 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC15.06■□□□□ 0
Lrrtm4Q80XG9 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC15.05■□□□□ 0
Lrrtm4Q80XG9 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Lrrtm4Q80XG9 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ 0
Lrrtm4Q80XG9 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Lrrtm4Q80XG9 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Lrrtm4Q80XG9 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Lrrtm4Q80XG9 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ 0
Lrrtm4Q80XG9 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Lrrtm4Q80XG9 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC15.05■□□□□ 0
Lrrtm4Q80XG9 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC15.05■□□□□ 0
Lrrtm4Q80XG9 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC15.05■□□□□ -0
Lrrtm4Q80XG9 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Lrrtm4Q80XG9 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
Lrrtm4Q80XG9 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Lrrtm4Q80XG9 Gm4899-201ENSMUST00000178708 719 ntBASIC15.05■□□□□ -0
Lrrtm4Q80XG9 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Lrrtm4Q80XG9 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC15.05■□□□□ -0
Lrrtm4Q80XG9 AC131709.1-201ENSMUST00000224731 1180 ntBASIC15.05■□□□□ -0
Lrrtm4Q80XG9 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Lrrtm4Q80XG9 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Lrrtm4Q80XG9 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC15.05■□□□□ -0
Lrrtm4Q80XG9 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Lrrtm4Q80XG9 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Lrrtm4Q80XG9 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC15.05■□□□□ -0
Lrrtm4Q80XG9 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.05■□□□□ -0
Lrrtm4Q80XG9 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC15.05■□□□□ -0
Lrrtm4Q80XG9 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Lrrtm4Q80XG9 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Lrrtm4Q80XG9 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Lrrtm4Q80XG9 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Lrrtm4Q80XG9 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Lrrtm4Q80XG9 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Lrrtm4Q80XG9 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Lrrtm4Q80XG9 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC15.04■□□□□ -0
Lrrtm4Q80XG9 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Lrrtm4Q80XG9 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Lrrtm4Q80XG9 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Lrrtm4Q80XG9 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Lrrtm4Q80XG9 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC15.04■□□□□ -0
Lrrtm4Q80XG9 Gm11873-201ENSMUST00000117877 1304 ntBASIC15.04■□□□□ -0
Lrrtm4Q80XG9 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC15.04■□□□□ -0
Lrrtm4Q80XG9 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC15.04■□□□□ -0
Lrrtm4Q80XG9 Gm8318-201ENSMUST00000182954 872 ntBASIC15.04■□□□□ -0
Lrrtm4Q80XG9 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC15.04■□□□□ -0
Lrrtm4Q80XG9 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC15.04■□□□□ -0
Lrrtm4Q80XG9 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC15.04■□□□□ -0
Lrrtm4Q80XG9 AC147366.1-201ENSMUST00000227671 852 ntBASIC15.04■□□□□ -0
Lrrtm4Q80XG9 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Lrrtm4Q80XG9 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Lrrtm4Q80XG9 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Lrrtm4Q80XG9 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Lrrtm4Q80XG9 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC15.04■□□□□ -0
Lrrtm4Q80XG9 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Lrrtm4Q80XG9 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.04■□□□□ -0
Lrrtm4Q80XG9 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Lrrtm4Q80XG9 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Lrrtm4Q80XG9 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Lrrtm4Q80XG9 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC15.04■□□□□ -0
Lrrtm4Q80XG9 AC122901.1-201ENSMUST00000214203 1790 ntBASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms