Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Usp6nlQ80XC3 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp6nlQ80XC3 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Usp6nlQ80XC3 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Usp6nlQ80XC3 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Usp6nlQ80XC3 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Usp6nlQ80XC3 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Usp6nlQ80XC3 Gm2272-201ENSMUST00000194903 582 ntBASIC17.06■□□□□ 0.32
Usp6nlQ80XC3 Gm20949-201ENSMUST00000206478 952 ntBASIC17.06■□□□□ 0.32
Usp6nlQ80XC3 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp6nlQ80XC3 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp6nlQ80XC3 Prkcz2-201ENSMUST00000206136 1756 ntBASIC17.06■□□□□ 0.32
Usp6nlQ80XC3 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp6nlQ80XC3 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp6nlQ80XC3 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp6nlQ80XC3 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp6nlQ80XC3 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp6nlQ80XC3 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp6nlQ80XC3 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Usp6nlQ80XC3 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC17.05■□□□□ 0.32
Usp6nlQ80XC3 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp6nlQ80XC3 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Usp6nlQ80XC3 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp6nlQ80XC3 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp6nlQ80XC3 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp6nlQ80XC3 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC17.05■□□□□ 0.32
Usp6nlQ80XC3 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC17.05■□□□□ 0.32
Usp6nlQ80XC3 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp6nlQ80XC3 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Usp6nlQ80XC3 Nudt18-203ENSMUST00000228768 1578 ntBASIC17.05■□□□□ 0.32
Usp6nlQ80XC3 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp6nlQ80XC3 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Usp6nlQ80XC3 Gm13410-201ENSMUST00000117058 1415 ntBASIC17.04■□□□□ 0.32
Usp6nlQ80XC3 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp6nlQ80XC3 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp6nlQ80XC3 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
Usp6nlQ80XC3 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Usp6nlQ80XC3 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp6nlQ80XC3 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Usp6nlQ80XC3 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp6nlQ80XC3 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp6nlQ80XC3 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Usp6nlQ80XC3 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.04■□□□□ 0.32
Usp6nlQ80XC3 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp6nlQ80XC3 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC17.04■□□□□ 0.32
Usp6nlQ80XC3 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp6nlQ80XC3 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp6nlQ80XC3 Gm14722-201ENSMUST00000118943 689 ntBASIC17.04■□□□□ 0.32
Usp6nlQ80XC3 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC17.04■□□□□ 0.32
Usp6nlQ80XC3 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Usp6nlQ80XC3 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp6nlQ80XC3 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC17.04■□□□□ 0.32
Usp6nlQ80XC3 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC17.04■□□□□ 0.32
Usp6nlQ80XC3 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC17.04■□□□□ 0.32
Usp6nlQ80XC3 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Usp6nlQ80XC3 Gm27321-201ENSMUST00000185021 205 ntBASIC17.04■□□□□ 0.32
Usp6nlQ80XC3 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC17.04■□□□□ 0.32
Usp6nlQ80XC3 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp6nlQ80XC3 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Usp6nlQ80XC3 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp6nlQ80XC3 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp6nlQ80XC3 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Usp6nlQ80XC3 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Usp6nlQ80XC3 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.04■□□□□ 0.32
Usp6nlQ80XC3 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp6nlQ80XC3 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.04■□□□□ 0.32
Usp6nlQ80XC3 AC126250.1-201ENSMUST00000228343 1768 ntBASIC17.04■□□□□ 0.32
Usp6nlQ80XC3 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp6nlQ80XC3 CT025626.1-201ENSMUST00000223735 1455 ntBASIC17.04■□□□□ 0.32
Usp6nlQ80XC3 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC17.04■□□□□ 0.32
Usp6nlQ80XC3 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp6nlQ80XC3 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp6nlQ80XC3 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Usp6nlQ80XC3 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp6nlQ80XC3 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp6nlQ80XC3 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp6nlQ80XC3 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Usp6nlQ80XC3 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp6nlQ80XC3 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp6nlQ80XC3 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.03■□□□□ 0.32
Usp6nlQ80XC3 Mir7023-201ENSMUST00000185093 64 ntBASIC17.03■□□□□ 0.32
Usp6nlQ80XC3 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC17.03■□□□□ 0.32
Usp6nlQ80XC3 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp6nlQ80XC3 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Usp6nlQ80XC3 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp6nlQ80XC3 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp6nlQ80XC3 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp6nlQ80XC3 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp6nlQ80XC3 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Usp6nlQ80XC3 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp6nlQ80XC3 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Usp6nlQ80XC3 Gm13127-201ENSMUST00000118978 1389 ntBASIC17.02■□□□□ 0.32
Usp6nlQ80XC3 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp6nlQ80XC3 AC025913.2-201ENSMUST00000220136 1766 ntBASIC17.02■□□□□ 0.32
Usp6nlQ80XC3 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Usp6nlQ80XC3 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC17.02■□□□□ 0.32
Usp6nlQ80XC3 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp6nlQ80XC3 Mir449b-201ENSMUST00000104833 80 ntBASIC17.02■□□□□ 0.32
Usp6nlQ80XC3 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Usp6nlQ80XC3 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms