Protein–RNA interactions for Protein: Q80V63

Prdm4, PR domain zinc finger protein 4, mousemouse

Predictions only

Length 803 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm4Q80V63 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Prdm4Q80V63 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Prdm4Q80V63 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Prdm4Q80V63 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Prdm4Q80V63 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.16■□□□□ 0.18
Prdm4Q80V63 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Prdm4Q80V63 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Prdm4Q80V63 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Prdm4Q80V63 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Prdm4Q80V63 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Prdm4Q80V63 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Prdm4Q80V63 Ap5m1-205ENSMUST00000227431 3757 ntBASIC16.16■□□□□ 0.18
Prdm4Q80V63 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Prdm4Q80V63 Gm43570-201ENSMUST00000199951 3688 ntBASIC16.16■□□□□ 0.18
Prdm4Q80V63 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Prdm4Q80V63 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Prdm4Q80V63 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.16■□□□□ 0.18
Prdm4Q80V63 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Prdm4Q80V63 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Prdm4Q80V63 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Prdm4Q80V63 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Prdm4Q80V63 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Prdm4Q80V63 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Prdm4Q80V63 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Prdm4Q80V63 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Prdm4Q80V63 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Prdm4Q80V63 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Prdm4Q80V63 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Prdm4Q80V63 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Prdm4Q80V63 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.15■□□□□ 0.18
Prdm4Q80V63 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Prdm4Q80V63 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Prdm4Q80V63 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.15■□□□□ 0.18
Prdm4Q80V63 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
Prdm4Q80V63 Mir1668-201ENSMUST00000184114 107 ntBASIC16.15■□□□□ 0.18
Prdm4Q80V63 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Prdm4Q80V63 Gm45058-201ENSMUST00000205810 766 ntBASIC16.15■□□□□ 0.18
Prdm4Q80V63 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC16.15■□□□□ 0.18
Prdm4Q80V63 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Prdm4Q80V63 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Prdm4Q80V63 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Prdm4Q80V63 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Prdm4Q80V63 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Prdm4Q80V63 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Prdm4Q80V63 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Prdm4Q80V63 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.15■□□□□ 0.18
Prdm4Q80V63 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Prdm4Q80V63 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Prdm4Q80V63 Gm12500-202ENSMUST00000186471 2428 ntBASIC16.15■□□□□ 0.18
Prdm4Q80V63 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.15■□□□□ 0.18
Prdm4Q80V63 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Prdm4Q80V63 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Prdm4Q80V63 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Prdm4Q80V63 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Prdm4Q80V63 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Prdm4Q80V63 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Prdm4Q80V63 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Prdm4Q80V63 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Prdm4Q80V63 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Prdm4Q80V63 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Prdm4Q80V63 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Prdm4Q80V63 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Prdm4Q80V63 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC16.14■□□□□ 0.17
Prdm4Q80V63 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Prdm4Q80V63 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Prdm4Q80V63 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.14■□□□□ 0.17
Prdm4Q80V63 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.14■□□□□ 0.17
Prdm4Q80V63 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.14■□□□□ 0.17
Prdm4Q80V63 Gm7370-201ENSMUST00000219471 767 ntBASIC16.14■□□□□ 0.17
Prdm4Q80V63 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Prdm4Q80V63 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Prdm4Q80V63 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Prdm4Q80V63 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Prdm4Q80V63 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Prdm4Q80V63 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Prdm4Q80V63 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.14■□□□□ 0.17
Prdm4Q80V63 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Prdm4Q80V63 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC16.14■□□□□ 0.17
Prdm4Q80V63 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Prdm4Q80V63 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.13■□□□□ 0.17
Prdm4Q80V63 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prdm4Q80V63 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prdm4Q80V63 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prdm4Q80V63 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Prdm4Q80V63 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prdm4Q80V63 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Prdm4Q80V63 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Prdm4Q80V63 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.13■□□□□ 0.17
Prdm4Q80V63 Gm21362-201ENSMUST00000194272 928 ntBASIC16.13■□□□□ 0.17
Prdm4Q80V63 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC16.13■□□□□ 0.17
Prdm4Q80V63 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
Prdm4Q80V63 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prdm4Q80V63 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prdm4Q80V63 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prdm4Q80V63 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prdm4Q80V63 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC16.13■□□□□ 0.17
Prdm4Q80V63 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Prdm4Q80V63 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prdm4Q80V63 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prdm4Q80V63 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms