Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Ctdp1Q7TSG2 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
Ctdp1Q7TSG2 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Ctdp1Q7TSG2 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Ctdp1Q7TSG2 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.96■□□□□ 0.3
Ctdp1Q7TSG2 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ctdp1Q7TSG2 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Ctdp1Q7TSG2 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
Ctdp1Q7TSG2 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ctdp1Q7TSG2 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ctdp1Q7TSG2 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ctdp1Q7TSG2 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ctdp1Q7TSG2 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ctdp1Q7TSG2 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ctdp1Q7TSG2 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ctdp1Q7TSG2 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ctdp1Q7TSG2 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC16.95■□□□□ 0.3
Ctdp1Q7TSG2 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC16.95■□□□□ 0.3
Ctdp1Q7TSG2 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC16.95■□□□□ 0.3
Ctdp1Q7TSG2 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ctdp1Q7TSG2 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ctdp1Q7TSG2 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ctdp1Q7TSG2 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ctdp1Q7TSG2 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ctdp1Q7TSG2 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ctdp1Q7TSG2 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ctdp1Q7TSG2 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Ctdp1Q7TSG2 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ctdp1Q7TSG2 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ctdp1Q7TSG2 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ctdp1Q7TSG2 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ctdp1Q7TSG2 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC16.94■□□□□ 0.3
Ctdp1Q7TSG2 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ctdp1Q7TSG2 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Ctdp1Q7TSG2 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ctdp1Q7TSG2 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Ctdp1Q7TSG2 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
Ctdp1Q7TSG2 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.94■□□□□ 0.3
Ctdp1Q7TSG2 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ctdp1Q7TSG2 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC16.94■□□□□ 0.3
Ctdp1Q7TSG2 Gm10459-201ENSMUST00000202708 1155 ntBASIC16.94■□□□□ 0.3
Ctdp1Q7TSG2 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ctdp1Q7TSG2 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ctdp1Q7TSG2 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ctdp1Q7TSG2 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ctdp1Q7TSG2 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ctdp1Q7TSG2 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ctdp1Q7TSG2 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ctdp1Q7TSG2 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ctdp1Q7TSG2 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ctdp1Q7TSG2 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
Ctdp1Q7TSG2 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ctdp1Q7TSG2 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ctdp1Q7TSG2 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ctdp1Q7TSG2 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Ctdp1Q7TSG2 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
Ctdp1Q7TSG2 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ctdp1Q7TSG2 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC16.93■□□□□ 0.3
Ctdp1Q7TSG2 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ctdp1Q7TSG2 Gm37722-201ENSMUST00000193757 208 ntBASIC16.93■□□□□ 0.3
Ctdp1Q7TSG2 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ctdp1Q7TSG2 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ctdp1Q7TSG2 Gm7367-201ENSMUST00000057611 492 ntBASIC16.93■□□□□ 0.3
Ctdp1Q7TSG2 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ctdp1Q7TSG2 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ctdp1Q7TSG2 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ctdp1Q7TSG2 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.93■□□□□ 0.3
Ctdp1Q7TSG2 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ctdp1Q7TSG2 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ctdp1Q7TSG2 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Ctdp1Q7TSG2 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
Ctdp1Q7TSG2 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ctdp1Q7TSG2 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ctdp1Q7TSG2 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ctdp1Q7TSG2 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Ctdp1Q7TSG2 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Ctdp1Q7TSG2 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
Ctdp1Q7TSG2 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ctdp1Q7TSG2 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC16.92■□□□□ 0.3
Ctdp1Q7TSG2 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ctdp1Q7TSG2 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ctdp1Q7TSG2 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ctdp1Q7TSG2 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Ctdp1Q7TSG2 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC16.92■□□□□ 0.3
Ctdp1Q7TSG2 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ctdp1Q7TSG2 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ctdp1Q7TSG2 Gm9889-202ENSMUST00000206983 1577 ntBASIC16.92■□□□□ 0.3
Ctdp1Q7TSG2 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ctdp1Q7TSG2 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ctdp1Q7TSG2 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ctdp1Q7TSG2 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ctdp1Q7TSG2 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ctdp1Q7TSG2 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ctdp1Q7TSG2 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ctdp1Q7TSG2 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ctdp1Q7TSG2 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ctdp1Q7TSG2 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ctdp1Q7TSG2 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC16.91■□□□□ 0.3
Ctdp1Q7TSG2 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC16.91■□□□□ 0.3
Ctdp1Q7TSG2 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms