Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Gm12134-201ENSMUST00000122109 520 ntBASIC14.91□□□□□ -0.02
Rfx4Q7TNK1 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Rfx4Q7TNK1 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC14.91□□□□□ -0.02
Rfx4Q7TNK1 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC14.91□□□□□ -0.02
Rfx4Q7TNK1 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.91□□□□□ -0.02
Rfx4Q7TNK1 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rfx4Q7TNK1 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rfx4Q7TNK1 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Rfx4Q7TNK1 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Rfx4Q7TNK1 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rfx4Q7TNK1 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rfx4Q7TNK1 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.91□□□□□ -0.02
Rfx4Q7TNK1 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC14.91□□□□□ -0.02
Rfx4Q7TNK1 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rfx4Q7TNK1 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Rfx4Q7TNK1 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rfx4Q7TNK1 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
Rfx4Q7TNK1 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rfx4Q7TNK1 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rfx4Q7TNK1 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rfx4Q7TNK1 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rfx4Q7TNK1 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rfx4Q7TNK1 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.9□□□□□ -0.02
Rfx4Q7TNK1 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Rfx4Q7TNK1 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rfx4Q7TNK1 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rfx4Q7TNK1 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rfx4Q7TNK1 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC14.9□□□□□ -0.02
Rfx4Q7TNK1 Gm44430-201ENSMUST00000203376 995 ntBASIC14.9□□□□□ -0.02
Rfx4Q7TNK1 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rfx4Q7TNK1 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rfx4Q7TNK1 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rfx4Q7TNK1 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rfx4Q7TNK1 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rfx4Q7TNK1 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rfx4Q7TNK1 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rfx4Q7TNK1 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rfx4Q7TNK1 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Rfx4Q7TNK1 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Rfx4Q7TNK1 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rfx4Q7TNK1 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Rfx4Q7TNK1 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Rfx4Q7TNK1 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rfx4Q7TNK1 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.89□□□□□ -0.03
Rfx4Q7TNK1 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rfx4Q7TNK1 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.89□□□□□ -0.03
Rfx4Q7TNK1 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Rfx4Q7TNK1 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rfx4Q7TNK1 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rfx4Q7TNK1 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rfx4Q7TNK1 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Rfx4Q7TNK1 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rfx4Q7TNK1 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rfx4Q7TNK1 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Rfx4Q7TNK1 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC14.89□□□□□ -0.03
Rfx4Q7TNK1 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC14.89□□□□□ -0.03
Rfx4Q7TNK1 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Rfx4Q7TNK1 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC14.89□□□□□ -0.03
Rfx4Q7TNK1 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC14.89□□□□□ -0.03
Rfx4Q7TNK1 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Rfx4Q7TNK1 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Rfx4Q7TNK1 Gm3272-201ENSMUST00000181181 1229 ntBASIC14.89□□□□□ -0.03
Rfx4Q7TNK1 Gm2274-201ENSMUST00000184539 609 ntBASIC14.89□□□□□ -0.03
Rfx4Q7TNK1 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC14.89□□□□□ -0.03
Rfx4Q7TNK1 Gm10566-201ENSMUST00000086739 996 ntBASIC14.89□□□□□ -0.03
Rfx4Q7TNK1 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Rfx4Q7TNK1 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Rfx4Q7TNK1 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Rfx4Q7TNK1 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rfx4Q7TNK1 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rfx4Q7TNK1 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.89□□□□□ -0.03
Rfx4Q7TNK1 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.89□□□□□ -0.03
Rfx4Q7TNK1 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rfx4Q7TNK1 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rfx4Q7TNK1 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Rfx4Q7TNK1 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rfx4Q7TNK1 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rfx4Q7TNK1 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rfx4Q7TNK1 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Rfx4Q7TNK1 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rfx4Q7TNK1 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Rfx4Q7TNK1 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Rfx4Q7TNK1 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Rfx4Q7TNK1 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC14.88□□□□□ -0.03
Rfx4Q7TNK1 Gm10052-201ENSMUST00000168019 960 ntBASIC14.88□□□□□ -0.03
Rfx4Q7TNK1 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rfx4Q7TNK1 AC135963.1-201ENSMUST00000211640 717 ntBASIC14.88□□□□□ -0.03
Rfx4Q7TNK1 Gm7729-201ENSMUST00000050143 801 ntBASIC14.88□□□□□ -0.03
Rfx4Q7TNK1 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Rfx4Q7TNK1 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rfx4Q7TNK1 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Rfx4Q7TNK1 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Rfx4Q7TNK1 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Rfx4Q7TNK1 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Rfx4Q7TNK1 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Rfx4Q7TNK1 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rfx4Q7TNK1 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rfx4Q7TNK1 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rfx4Q7TNK1 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rfx4Q7TNK1 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms