Protein–RNA interactions for Protein: Q7TNH6

Nphp3, Nephrocystin-3, mousemouse

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp3Q7TNH6 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nphp3Q7TNH6 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nphp3Q7TNH6 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nphp3Q7TNH6 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nphp3Q7TNH6 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nphp3Q7TNH6 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nphp3Q7TNH6 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nphp3Q7TNH6 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nphp3Q7TNH6 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nphp3Q7TNH6 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nphp3Q7TNH6 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nphp3Q7TNH6 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nphp3Q7TNH6 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nphp3Q7TNH6 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nphp3Q7TNH6 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nphp3Q7TNH6 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC18.8■□□□□ 0.6
Nphp3Q7TNH6 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nphp3Q7TNH6 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nphp3Q7TNH6 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Nphp3Q7TNH6 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Nphp3Q7TNH6 Gm15467-201ENSMUST00000120582 445 ntBASIC18.79■□□□□ 0.6
Nphp3Q7TNH6 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Nphp3Q7TNH6 Gm8000-201ENSMUST00000188378 592 ntBASIC18.79■□□□□ 0.6
Nphp3Q7TNH6 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC18.79■□□□□ 0.6
Nphp3Q7TNH6 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nphp3Q7TNH6 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nphp3Q7TNH6 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Nphp3Q7TNH6 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nphp3Q7TNH6 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Nphp3Q7TNH6 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nphp3Q7TNH6 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC18.79■□□□□ 0.6
Nphp3Q7TNH6 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Nphp3Q7TNH6 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Nphp3Q7TNH6 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nphp3Q7TNH6 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nphp3Q7TNH6 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Nphp3Q7TNH6 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nphp3Q7TNH6 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nphp3Q7TNH6 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC18.78■□□□□ 0.6
Nphp3Q7TNH6 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC18.78■□□□□ 0.6
Nphp3Q7TNH6 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Nphp3Q7TNH6 AC151836.1-202ENSMUST00000226259 753 ntBASIC18.78■□□□□ 0.6
Nphp3Q7TNH6 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Nphp3Q7TNH6 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nphp3Q7TNH6 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nphp3Q7TNH6 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nphp3Q7TNH6 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nphp3Q7TNH6 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nphp3Q7TNH6 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nphp3Q7TNH6 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Nphp3Q7TNH6 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nphp3Q7TNH6 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nphp3Q7TNH6 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC18.78■□□□□ 0.6
Nphp3Q7TNH6 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nphp3Q7TNH6 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nphp3Q7TNH6 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nphp3Q7TNH6 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nphp3Q7TNH6 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nphp3Q7TNH6 Gm13597-201ENSMUST00000121239 375 ntBASIC18.77■□□□□ 0.6
Nphp3Q7TNH6 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC18.77■□□□□ 0.6
Nphp3Q7TNH6 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
Nphp3Q7TNH6 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC18.77■□□□□ 0.6
Nphp3Q7TNH6 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nphp3Q7TNH6 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nphp3Q7TNH6 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC18.77■□□□□ 0.6
Nphp3Q7TNH6 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nphp3Q7TNH6 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nphp3Q7TNH6 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nphp3Q7TNH6 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Nphp3Q7TNH6 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Nphp3Q7TNH6 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
Nphp3Q7TNH6 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
Nphp3Q7TNH6 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
Nphp3Q7TNH6 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Nphp3Q7TNH6 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Nphp3Q7TNH6 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nphp3Q7TNH6 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC18.76■□□□□ 0.59
Nphp3Q7TNH6 Gm4995-201ENSMUST00000117247 432 ntBASIC18.76■□□□□ 0.59
Nphp3Q7TNH6 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC18.76■□□□□ 0.59
Nphp3Q7TNH6 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC18.76■□□□□ 0.59
Nphp3Q7TNH6 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Nphp3Q7TNH6 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC18.76■□□□□ 0.59
Nphp3Q7TNH6 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC18.76■□□□□ 0.59
Nphp3Q7TNH6 Gm5264-201ENSMUST00000190584 848 ntBASIC18.76■□□□□ 0.59
Nphp3Q7TNH6 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC18.76■□□□□ 0.59
Nphp3Q7TNH6 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nphp3Q7TNH6 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Nphp3Q7TNH6 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nphp3Q7TNH6 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Nphp3Q7TNH6 Gm5867-201ENSMUST00000063197 592 ntBASIC18.76■□□□□ 0.59
Nphp3Q7TNH6 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nphp3Q7TNH6 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Nphp3Q7TNH6 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nphp3Q7TNH6 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nphp3Q7TNH6 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nphp3Q7TNH6 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nphp3Q7TNH6 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nphp3Q7TNH6 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nphp3Q7TNH6 Gm14494-201ENSMUST00000118786 435 ntBASIC18.75■□□□□ 0.59
Nphp3Q7TNH6 Gm12260-201ENSMUST00000122447 411 ntBASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms