Protein–RNA interactions for Protein: Q6U7R4

Timd4, T-cell immunoglobulin and mucin domain-containing protein 4, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timd4Q6U7R4 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Timd4Q6U7R4 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Timd4Q6U7R4 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Timd4Q6U7R4 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Timd4Q6U7R4 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Timd4Q6U7R4 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Timd4Q6U7R4 Gm3928-201ENSMUST00000121141 1307 ntBASIC14.39□□□□□ -0.11
Timd4Q6U7R4 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Timd4Q6U7R4 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Timd4Q6U7R4 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Timd4Q6U7R4 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Timd4Q6U7R4 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Timd4Q6U7R4 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Timd4Q6U7R4 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Timd4Q6U7R4 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Timd4Q6U7R4 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Timd4Q6U7R4 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
Timd4Q6U7R4 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Timd4Q6U7R4 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Timd4Q6U7R4 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Timd4Q6U7R4 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.38□□□□□ -0.11
Timd4Q6U7R4 Mir5131-201ENSMUST00000175426 93 ntBASIC14.38□□□□□ -0.11
Timd4Q6U7R4 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Timd4Q6U7R4 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.38□□□□□ -0.11
Timd4Q6U7R4 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC14.38□□□□□ -0.11
Timd4Q6U7R4 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.38□□□□□ -0.11
Timd4Q6U7R4 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Timd4Q6U7R4 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Timd4Q6U7R4 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Timd4Q6U7R4 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.38□□□□□ -0.11
Timd4Q6U7R4 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Timd4Q6U7R4 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Timd4Q6U7R4 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Timd4Q6U7R4 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Timd4Q6U7R4 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Timd4Q6U7R4 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Timd4Q6U7R4 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Timd4Q6U7R4 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Timd4Q6U7R4 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Timd4Q6U7R4 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Timd4Q6U7R4 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Timd4Q6U7R4 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Timd4Q6U7R4 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Timd4Q6U7R4 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Timd4Q6U7R4 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Timd4Q6U7R4 Gm15358-201ENSMUST00000119249 520 ntBASIC14.37□□□□□ -0.11
Timd4Q6U7R4 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.37□□□□□ -0.11
Timd4Q6U7R4 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Timd4Q6U7R4 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.37□□□□□ -0.11
Timd4Q6U7R4 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Timd4Q6U7R4 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.37□□□□□ -0.11
Timd4Q6U7R4 Gm9449-201ENSMUST00000207265 1011 ntBASIC14.37□□□□□ -0.11
Timd4Q6U7R4 Gm18195-201ENSMUST00000207604 706 ntBASIC14.37□□□□□ -0.11
Timd4Q6U7R4 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC14.37□□□□□ -0.11
Timd4Q6U7R4 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Timd4Q6U7R4 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.37□□□□□ -0.11
Timd4Q6U7R4 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Timd4Q6U7R4 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Timd4Q6U7R4 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Timd4Q6U7R4 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Timd4Q6U7R4 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Timd4Q6U7R4 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Timd4Q6U7R4 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Timd4Q6U7R4 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Timd4Q6U7R4 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Timd4Q6U7R4 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Timd4Q6U7R4 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Timd4Q6U7R4 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Timd4Q6U7R4 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Timd4Q6U7R4 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Timd4Q6U7R4 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.36□□□□□ -0.11
Timd4Q6U7R4 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Timd4Q6U7R4 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Timd4Q6U7R4 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Timd4Q6U7R4 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Timd4Q6U7R4 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Timd4Q6U7R4 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Timd4Q6U7R4 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Timd4Q6U7R4 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Timd4Q6U7R4 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.36□□□□□ -0.11
Timd4Q6U7R4 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Timd4Q6U7R4 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Timd4Q6U7R4 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Timd4Q6U7R4 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.36□□□□□ -0.11
Timd4Q6U7R4 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Timd4Q6U7R4 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Timd4Q6U7R4 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Timd4Q6U7R4 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Timd4Q6U7R4 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Timd4Q6U7R4 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Timd4Q6U7R4 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC14.36□□□□□ -0.11
Timd4Q6U7R4 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.36□□□□□ -0.11
Timd4Q6U7R4 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Timd4Q6U7R4 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Timd4Q6U7R4 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Timd4Q6U7R4 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Timd4Q6U7R4 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Timd4Q6U7R4 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Timd4Q6U7R4 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Timd4Q6U7R4 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms