Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Npc1l1Q6T3U4 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Npc1l1Q6T3U4 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Npc1l1Q6T3U4 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Npc1l1Q6T3U4 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC18.51■□□□□ 0.55
Npc1l1Q6T3U4 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Npc1l1Q6T3U4 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Npc1l1Q6T3U4 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC18.51■□□□□ 0.55
Npc1l1Q6T3U4 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC18.51■□□□□ 0.55
Npc1l1Q6T3U4 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Npc1l1Q6T3U4 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Npc1l1Q6T3U4 Gm7063-201ENSMUST00000186840 981 ntBASIC18.51■□□□□ 0.55
Npc1l1Q6T3U4 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
Npc1l1Q6T3U4 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Npc1l1Q6T3U4 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Npc1l1Q6T3U4 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Npc1l1Q6T3U4 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Npc1l1Q6T3U4 Gm38318-201ENSMUST00000195769 1706 ntBASIC18.51■□□□□ 0.55
Npc1l1Q6T3U4 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Npc1l1Q6T3U4 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC18.51■□□□□ 0.55
Npc1l1Q6T3U4 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Npc1l1Q6T3U4 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Npc1l1Q6T3U4 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Npc1l1Q6T3U4 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Npc1l1Q6T3U4 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Npc1l1Q6T3U4 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC18.51■□□□□ 0.55
Npc1l1Q6T3U4 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Npc1l1Q6T3U4 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Npc1l1Q6T3U4 AC133083.1-201ENSMUST00000221736 2209 ntBASIC18.51■□□□□ 0.55
Npc1l1Q6T3U4 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Npc1l1Q6T3U4 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Npc1l1Q6T3U4 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC18.5■□□□□ 0.55
Npc1l1Q6T3U4 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Npc1l1Q6T3U4 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC18.5■□□□□ 0.55
Npc1l1Q6T3U4 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Npc1l1Q6T3U4 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Npc1l1Q6T3U4 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Npc1l1Q6T3U4 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC18.5■□□□□ 0.55
Npc1l1Q6T3U4 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Npc1l1Q6T3U4 Gm13294-201ENSMUST00000121757 1330 ntBASIC18.5■□□□□ 0.55
Npc1l1Q6T3U4 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Npc1l1Q6T3U4 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Npc1l1Q6T3U4 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Npc1l1Q6T3U4 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Npc1l1Q6T3U4 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC18.5■□□□□ 0.55
Npc1l1Q6T3U4 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Npc1l1Q6T3U4 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Npc1l1Q6T3U4 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Npc1l1Q6T3U4 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Npc1l1Q6T3U4 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC18.49■□□□□ 0.55
Npc1l1Q6T3U4 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Npc1l1Q6T3U4 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC18.49■□□□□ 0.55
Npc1l1Q6T3U4 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Npc1l1Q6T3U4 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Npc1l1Q6T3U4 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC18.49■□□□□ 0.55
Npc1l1Q6T3U4 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Npc1l1Q6T3U4 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Npc1l1Q6T3U4 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Npc1l1Q6T3U4 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Npc1l1Q6T3U4 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Npc1l1Q6T3U4 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Npc1l1Q6T3U4 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
Npc1l1Q6T3U4 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Npc1l1Q6T3U4 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC18.49■□□□□ 0.55
Npc1l1Q6T3U4 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
Npc1l1Q6T3U4 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Npc1l1Q6T3U4 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Npc1l1Q6T3U4 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Npc1l1Q6T3U4 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC18.49■□□□□ 0.55
Npc1l1Q6T3U4 Gm17271-201ENSMUST00000165535 355 ntBASIC18.49■□□□□ 0.55
Npc1l1Q6T3U4 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Npc1l1Q6T3U4 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC18.49■□□□□ 0.55
Npc1l1Q6T3U4 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC18.49■□□□□ 0.55
Npc1l1Q6T3U4 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC18.49■□□□□ 0.55
Npc1l1Q6T3U4 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Npc1l1Q6T3U4 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Npc1l1Q6T3U4 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Npc1l1Q6T3U4 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Npc1l1Q6T3U4 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Npc1l1Q6T3U4 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Npc1l1Q6T3U4 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Npc1l1Q6T3U4 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Npc1l1Q6T3U4 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Npc1l1Q6T3U4 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Npc1l1Q6T3U4 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC18.48■□□□□ 0.55
Npc1l1Q6T3U4 Gm14701-201ENSMUST00000117156 348 ntBASIC18.48■□□□□ 0.55
Npc1l1Q6T3U4 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC18.48■□□□□ 0.55
Npc1l1Q6T3U4 Gm17968-201ENSMUST00000194902 784 ntBASIC18.48■□□□□ 0.55
Npc1l1Q6T3U4 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Npc1l1Q6T3U4 AC157650.3-201ENSMUST00000225058 1476 ntBASIC18.47■□□□□ 0.55
Npc1l1Q6T3U4 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Npc1l1Q6T3U4 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Npc1l1Q6T3U4 Gm27528-202ENSMUST00000222916 2012 ntBASIC18.47■□□□□ 0.55
Npc1l1Q6T3U4 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Npc1l1Q6T3U4 AC119177.1-201ENSMUST00000227647 1332 ntBASIC18.47■□□□□ 0.55
Npc1l1Q6T3U4 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Npc1l1Q6T3U4 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Npc1l1Q6T3U4 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Npc1l1Q6T3U4 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Npc1l1Q6T3U4 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms