Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nup98Q6PFD9 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nup98Q6PFD9 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nup98Q6PFD9 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Nup98Q6PFD9 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nup98Q6PFD9 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Nup98Q6PFD9 Celf4-206ENSMUST00000224553 1729 ntBASIC18.08■□□□□ 0.49
Nup98Q6PFD9 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Nup98Q6PFD9 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Nup98Q6PFD9 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Nup98Q6PFD9 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Nup98Q6PFD9 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC18.08■□□□□ 0.48
Nup98Q6PFD9 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nup98Q6PFD9 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nup98Q6PFD9 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nup98Q6PFD9 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Nup98Q6PFD9 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC18.08■□□□□ 0.48
Nup98Q6PFD9 Gm13127-201ENSMUST00000118978 1389 ntBASIC18.07■□□□□ 0.48
Nup98Q6PFD9 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC18.07■□□□□ 0.48
Nup98Q6PFD9 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC18.07■□□□□ 0.48
Nup98Q6PFD9 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC18.07■□□□□ 0.48
Nup98Q6PFD9 Mir7023-201ENSMUST00000185093 64 ntBASIC18.07■□□□□ 0.48
Nup98Q6PFD9 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Nup98Q6PFD9 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Nup98Q6PFD9 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nup98Q6PFD9 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nup98Q6PFD9 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nup98Q6PFD9 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Nup98Q6PFD9 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nup98Q6PFD9 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC18.07■□□□□ 0.48
Nup98Q6PFD9 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC18.07■□□□□ 0.48
Nup98Q6PFD9 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC18.07■□□□□ 0.48
Nup98Q6PFD9 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Nup98Q6PFD9 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nup98Q6PFD9 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nup98Q6PFD9 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC18.07■□□□□ 0.48
Nup98Q6PFD9 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nup98Q6PFD9 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Nup98Q6PFD9 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nup98Q6PFD9 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nup98Q6PFD9 Gm11543-201ENSMUST00000120758 370 ntBASIC18.06■□□□□ 0.48
Nup98Q6PFD9 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
Nup98Q6PFD9 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Nup98Q6PFD9 Gm18737-201ENSMUST00000173594 937 ntBASIC18.06■□□□□ 0.48
Nup98Q6PFD9 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC18.06■□□□□ 0.48
Nup98Q6PFD9 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nup98Q6PFD9 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nup98Q6PFD9 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Nup98Q6PFD9 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Nup98Q6PFD9 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nup98Q6PFD9 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nup98Q6PFD9 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Nup98Q6PFD9 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nup98Q6PFD9 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Nup98Q6PFD9 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nup98Q6PFD9 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC18.05■□□□□ 0.48
Nup98Q6PFD9 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
Nup98Q6PFD9 Gm13233-201ENSMUST00000118760 1443 ntBASIC18.05■□□□□ 0.48
Nup98Q6PFD9 Gm13244-201ENSMUST00000118855 1446 ntBASIC18.05■□□□□ 0.48
Nup98Q6PFD9 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Nup98Q6PFD9 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Nup98Q6PFD9 Gm4691-201ENSMUST00000182339 1000 ntBASIC18.05■□□□□ 0.48
Nup98Q6PFD9 Gm2451-201ENSMUST00000199447 999 ntBASIC18.05■□□□□ 0.48
Nup98Q6PFD9 Gm10290-201ENSMUST00000200451 999 ntBASIC18.05■□□□□ 0.48
Nup98Q6PFD9 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nup98Q6PFD9 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Nup98Q6PFD9 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Nup98Q6PFD9 Wdyhv1-206ENSMUST00000227142 786 ntBASIC18.05■□□□□ 0.48
Nup98Q6PFD9 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nup98Q6PFD9 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Nup98Q6PFD9 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Nup98Q6PFD9 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nup98Q6PFD9 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nup98Q6PFD9 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Nup98Q6PFD9 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Nup98Q6PFD9 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nup98Q6PFD9 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Nup98Q6PFD9 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nup98Q6PFD9 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nup98Q6PFD9 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC18.05■□□□□ 0.48
Nup98Q6PFD9 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC18.05■□□□□ 0.48
Nup98Q6PFD9 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC18.05■□□□□ 0.48
Nup98Q6PFD9 Gm15483-201ENSMUST00000120338 456 ntBASIC18.05■□□□□ 0.48
Nup98Q6PFD9 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC18.05■□□□□ 0.48
Nup98Q6PFD9 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nup98Q6PFD9 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC18.05■□□□□ 0.48
Nup98Q6PFD9 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Nup98Q6PFD9 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Nup98Q6PFD9 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nup98Q6PFD9 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Nup98Q6PFD9 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC18.04■□□□□ 0.48
Nup98Q6PFD9 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Nup98Q6PFD9 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nup98Q6PFD9 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nup98Q6PFD9 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nup98Q6PFD9 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Nup98Q6PFD9 Gm5779-201ENSMUST00000218467 910 ntBASIC18.04■□□□□ 0.48
Nup98Q6PFD9 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nup98Q6PFD9 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Nup98Q6PFD9 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms