Protein–RNA interactions for Protein: Q6PE54

Dhx40, Probable ATP-dependent RNA helicase DHX40, mousemouse

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dhx40Q6PE54 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Dhx40Q6PE54 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Dhx40Q6PE54 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Dhx40Q6PE54 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Dhx40Q6PE54 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Dhx40Q6PE54 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Dhx40Q6PE54 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Dhx40Q6PE54 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Dhx40Q6PE54 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Dhx40Q6PE54 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Dhx40Q6PE54 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Dhx40Q6PE54 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
Dhx40Q6PE54 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Dhx40Q6PE54 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Dhx40Q6PE54 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Dhx40Q6PE54 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Dhx40Q6PE54 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Dhx40Q6PE54 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Dhx40Q6PE54 Gm25406-201ENSMUST00000157599 105 ntBASIC17.22■□□□□ 0.35
Dhx40Q6PE54 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.22■□□□□ 0.35
Dhx40Q6PE54 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.22■□□□□ 0.35
Dhx40Q6PE54 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Dhx40Q6PE54 Gm45504-201ENSMUST00000211407 2107 ntBASIC17.22■□□□□ 0.35
Dhx40Q6PE54 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC17.22■□□□□ 0.35
Dhx40Q6PE54 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Dhx40Q6PE54 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Dhx40Q6PE54 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Dhx40Q6PE54 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC17.22■□□□□ 0.35
Dhx40Q6PE54 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Dhx40Q6PE54 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Dhx40Q6PE54 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Dhx40Q6PE54 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Dhx40Q6PE54 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Dhx40Q6PE54 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Dhx40Q6PE54 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Dhx40Q6PE54 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Dhx40Q6PE54 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Dhx40Q6PE54 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Dhx40Q6PE54 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Dhx40Q6PE54 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Dhx40Q6PE54 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
Dhx40Q6PE54 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Dhx40Q6PE54 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Dhx40Q6PE54 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Dhx40Q6PE54 Gm9013-201ENSMUST00000132939 882 ntBASIC17.21■□□□□ 0.35
Dhx40Q6PE54 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Dhx40Q6PE54 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Dhx40Q6PE54 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.21■□□□□ 0.35
Dhx40Q6PE54 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Dhx40Q6PE54 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Dhx40Q6PE54 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Dhx40Q6PE54 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Dhx40Q6PE54 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Dhx40Q6PE54 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Dhx40Q6PE54 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Dhx40Q6PE54 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Dhx40Q6PE54 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Dhx40Q6PE54 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Dhx40Q6PE54 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Dhx40Q6PE54 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Dhx40Q6PE54 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Dhx40Q6PE54 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Dhx40Q6PE54 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC17.2■□□□□ 0.34
Dhx40Q6PE54 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Dhx40Q6PE54 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Dhx40Q6PE54 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Dhx40Q6PE54 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Dhx40Q6PE54 Gm1818-201ENSMUST00000169406 1184 ntBASIC17.2■□□□□ 0.34
Dhx40Q6PE54 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Dhx40Q6PE54 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Dhx40Q6PE54 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Dhx40Q6PE54 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Dhx40Q6PE54 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Dhx40Q6PE54 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Dhx40Q6PE54 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Dhx40Q6PE54 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Dhx40Q6PE54 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Dhx40Q6PE54 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Dhx40Q6PE54 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Dhx40Q6PE54 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Dhx40Q6PE54 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Dhx40Q6PE54 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Dhx40Q6PE54 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Dhx40Q6PE54 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC17.19■□□□□ 0.34
Dhx40Q6PE54 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Dhx40Q6PE54 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC17.19■□□□□ 0.34
Dhx40Q6PE54 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Dhx40Q6PE54 Gm6623-201ENSMUST00000173570 544 ntBASIC17.19■□□□□ 0.34
Dhx40Q6PE54 Gm5587-201ENSMUST00000206270 674 ntBASIC17.19■□□□□ 0.34
Dhx40Q6PE54 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC17.19■□□□□ 0.34
Dhx40Q6PE54 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Dhx40Q6PE54 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Dhx40Q6PE54 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Dhx40Q6PE54 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
Dhx40Q6PE54 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Dhx40Q6PE54 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Dhx40Q6PE54 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Dhx40Q6PE54 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Dhx40Q6PE54 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Dhx40Q6PE54 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms