Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC13.59□□□□□ -0.23
Snrnp40Q6PE01 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Snrnp40Q6PE01 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Snrnp40Q6PE01 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Snrnp40Q6PE01 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC13.59□□□□□ -0.23
Snrnp40Q6PE01 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC13.59□□□□□ -0.23
Snrnp40Q6PE01 Gm10499-201ENSMUST00000174094 934 ntBASIC13.59□□□□□ -0.23
Snrnp40Q6PE01 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Snrnp40Q6PE01 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC13.59□□□□□ -0.23
Snrnp40Q6PE01 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC13.59□□□□□ -0.23
Snrnp40Q6PE01 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC13.59□□□□□ -0.23
Snrnp40Q6PE01 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Snrnp40Q6PE01 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Snrnp40Q6PE01 Gm43294-201ENSMUST00000202850 2490 ntBASIC13.59□□□□□ -0.23
Snrnp40Q6PE01 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Snrnp40Q6PE01 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Snrnp40Q6PE01 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Snrnp40Q6PE01 AC130669.1-201ENSMUST00000228537 1672 ntBASIC13.59□□□□□ -0.23
Snrnp40Q6PE01 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Snrnp40Q6PE01 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Snrnp40Q6PE01 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Snrnp40Q6PE01 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
Snrnp40Q6PE01 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Snrnp40Q6PE01 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.23
Snrnp40Q6PE01 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Snrnp40Q6PE01 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Snrnp40Q6PE01 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Snrnp40Q6PE01 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Snrnp40Q6PE01 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Snrnp40Q6PE01 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Snrnp40Q6PE01 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Snrnp40Q6PE01 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC13.58□□□□□ -0.24
Snrnp40Q6PE01 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC13.58□□□□□ -0.24
Snrnp40Q6PE01 Gm5866-201ENSMUST00000177881 973 ntBASIC13.58□□□□□ -0.24
Snrnp40Q6PE01 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Snrnp40Q6PE01 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Snrnp40Q6PE01 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC13.58□□□□□ -0.24
Snrnp40Q6PE01 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Snrnp40Q6PE01 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Snrnp40Q6PE01 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Snrnp40Q6PE01 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Snrnp40Q6PE01 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Snrnp40Q6PE01 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Snrnp40Q6PE01 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Snrnp40Q6PE01 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Snrnp40Q6PE01 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Snrnp40Q6PE01 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Snrnp40Q6PE01 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Snrnp40Q6PE01 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Snrnp40Q6PE01 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Snrnp40Q6PE01 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Snrnp40Q6PE01 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Snrnp40Q6PE01 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Snrnp40Q6PE01 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Snrnp40Q6PE01 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Snrnp40Q6PE01 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Snrnp40Q6PE01 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Snrnp40Q6PE01 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Snrnp40Q6PE01 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Snrnp40Q6PE01 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Snrnp40Q6PE01 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Snrnp40Q6PE01 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Snrnp40Q6PE01 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Snrnp40Q6PE01 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Snrnp40Q6PE01 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Snrnp40Q6PE01 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Snrnp40Q6PE01 Gm12151-201ENSMUST00000121374 290 ntBASIC13.57□□□□□ -0.24
Snrnp40Q6PE01 Gm37277-201ENSMUST00000194052 1111 ntBASIC13.57□□□□□ -0.24
Snrnp40Q6PE01 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC13.57□□□□□ -0.24
Snrnp40Q6PE01 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Snrnp40Q6PE01 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Snrnp40Q6PE01 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Snrnp40Q6PE01 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Snrnp40Q6PE01 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Snrnp40Q6PE01 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Snrnp40Q6PE01 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC13.57□□□□□ -0.24
Snrnp40Q6PE01 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Snrnp40Q6PE01 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Snrnp40Q6PE01 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Snrnp40Q6PE01 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Snrnp40Q6PE01 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Snrnp40Q6PE01 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Snrnp40Q6PE01 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
Snrnp40Q6PE01 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Snrnp40Q6PE01 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Snrnp40Q6PE01 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Snrnp40Q6PE01 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Snrnp40Q6PE01 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Snrnp40Q6PE01 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Snrnp40Q6PE01 Gm6973-201ENSMUST00000117080 721 ntBASIC13.56□□□□□ -0.24
Snrnp40Q6PE01 Gm11424-201ENSMUST00000121929 829 ntBASIC13.56□□□□□ -0.24
Snrnp40Q6PE01 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Snrnp40Q6PE01 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Snrnp40Q6PE01 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC13.56□□□□□ -0.24
Snrnp40Q6PE01 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Snrnp40Q6PE01 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Snrnp40Q6PE01 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Snrnp40Q6PE01 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Snrnp40Q6PE01 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Snrnp40Q6PE01 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 73.7 ms