Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Chd4Q6PDQ2 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Chd4Q6PDQ2 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC20.02■□□□□ 0.8
Chd4Q6PDQ2 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC20.02■□□□□ 0.8
Chd4Q6PDQ2 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Chd4Q6PDQ2 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Chd4Q6PDQ2 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Chd4Q6PDQ2 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Chd4Q6PDQ2 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Chd4Q6PDQ2 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC20.02■□□□□ 0.79
Chd4Q6PDQ2 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC20.02■□□□□ 0.79
Chd4Q6PDQ2 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC20.02■□□□□ 0.79
Chd4Q6PDQ2 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Chd4Q6PDQ2 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Chd4Q6PDQ2 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Chd4Q6PDQ2 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Chd4Q6PDQ2 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Chd4Q6PDQ2 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC20.01■□□□□ 0.79
Chd4Q6PDQ2 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Chd4Q6PDQ2 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC20.01■□□□□ 0.79
Chd4Q6PDQ2 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Chd4Q6PDQ2 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
Chd4Q6PDQ2 Gm13233-201ENSMUST00000118760 1443 ntBASIC20.01■□□□□ 0.79
Chd4Q6PDQ2 Gm13244-201ENSMUST00000118855 1446 ntBASIC20.01■□□□□ 0.79
Chd4Q6PDQ2 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC20■□□□□ 0.79
Chd4Q6PDQ2 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Chd4Q6PDQ2 AC164565.1-201ENSMUST00000217520 1484 ntBASIC20■□□□□ 0.79
Chd4Q6PDQ2 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Chd4Q6PDQ2 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Chd4Q6PDQ2 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC20■□□□□ 0.79
Chd4Q6PDQ2 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC20■□□□□ 0.79
Chd4Q6PDQ2 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Chd4Q6PDQ2 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Chd4Q6PDQ2 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Chd4Q6PDQ2 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC20■□□□□ 0.79
Chd4Q6PDQ2 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
Chd4Q6PDQ2 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Chd4Q6PDQ2 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Chd4Q6PDQ2 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Chd4Q6PDQ2 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Chd4Q6PDQ2 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Chd4Q6PDQ2 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC19.99■□□□□ 0.79
Chd4Q6PDQ2 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Chd4Q6PDQ2 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Chd4Q6PDQ2 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Chd4Q6PDQ2 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Chd4Q6PDQ2 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Chd4Q6PDQ2 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Chd4Q6PDQ2 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC19.99■□□□□ 0.79
Chd4Q6PDQ2 Gm4691-201ENSMUST00000182339 1000 ntBASIC19.99■□□□□ 0.79
Chd4Q6PDQ2 Gm2451-201ENSMUST00000199447 999 ntBASIC19.99■□□□□ 0.79
Chd4Q6PDQ2 Gm10290-201ENSMUST00000200451 999 ntBASIC19.99■□□□□ 0.79
Chd4Q6PDQ2 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC19.99■□□□□ 0.79
Chd4Q6PDQ2 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Chd4Q6PDQ2 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Chd4Q6PDQ2 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Chd4Q6PDQ2 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Chd4Q6PDQ2 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Chd4Q6PDQ2 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chd4Q6PDQ2 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chd4Q6PDQ2 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Chd4Q6PDQ2 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chd4Q6PDQ2 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chd4Q6PDQ2 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chd4Q6PDQ2 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Chd4Q6PDQ2 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Chd4Q6PDQ2 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Chd4Q6PDQ2 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Chd4Q6PDQ2 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chd4Q6PDQ2 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chd4Q6PDQ2 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Chd4Q6PDQ2 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chd4Q6PDQ2 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chd4Q6PDQ2 Gm5479-201ENSMUST00000160578 435 ntBASIC19.98■□□□□ 0.79
Chd4Q6PDQ2 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chd4Q6PDQ2 Gm2423-201ENSMUST00000074863 733 ntBASIC19.98■□□□□ 0.79
Chd4Q6PDQ2 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chd4Q6PDQ2 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chd4Q6PDQ2 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chd4Q6PDQ2 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chd4Q6PDQ2 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Chd4Q6PDQ2 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC19.97■□□□□ 0.79
Chd4Q6PDQ2 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chd4Q6PDQ2 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Chd4Q6PDQ2 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chd4Q6PDQ2 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chd4Q6PDQ2 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chd4Q6PDQ2 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chd4Q6PDQ2 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chd4Q6PDQ2 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chd4Q6PDQ2 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC19.97■□□□□ 0.79
Chd4Q6PDQ2 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Chd4Q6PDQ2 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chd4Q6PDQ2 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chd4Q6PDQ2 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chd4Q6PDQ2 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chd4Q6PDQ2 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chd4Q6PDQ2 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC19.97■□□□□ 0.79
Chd4Q6PDQ2 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Chd4Q6PDQ2 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC19.97■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms