Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Abcf1Q6P542 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Abcf1Q6P542 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
Abcf1Q6P542 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17.38■□□□□ 0.37
Abcf1Q6P542 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Abcf1Q6P542 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Abcf1Q6P542 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Abcf1Q6P542 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC17.38■□□□□ 0.37
Abcf1Q6P542 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Abcf1Q6P542 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Abcf1Q6P542 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Abcf1Q6P542 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Abcf1Q6P542 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Abcf1Q6P542 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Abcf1Q6P542 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Abcf1Q6P542 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Abcf1Q6P542 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Abcf1Q6P542 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Abcf1Q6P542 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Abcf1Q6P542 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Abcf1Q6P542 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Abcf1Q6P542 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Abcf1Q6P542 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Abcf1Q6P542 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Abcf1Q6P542 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC17.37■□□□□ 0.37
Abcf1Q6P542 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Abcf1Q6P542 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC17.37■□□□□ 0.37
Abcf1Q6P542 Gm17807-201ENSMUST00000186869 298 ntBASIC17.37■□□□□ 0.37
Abcf1Q6P542 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Abcf1Q6P542 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Abcf1Q6P542 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Abcf1Q6P542 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Abcf1Q6P542 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Abcf1Q6P542 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Abcf1Q6P542 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Abcf1Q6P542 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Abcf1Q6P542 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Abcf1Q6P542 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Abcf1Q6P542 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Abcf1Q6P542 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Abcf1Q6P542 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Abcf1Q6P542 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Abcf1Q6P542 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Abcf1Q6P542 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC17.36■□□□□ 0.37
Abcf1Q6P542 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC17.36■□□□□ 0.37
Abcf1Q6P542 Otx2os1-206ENSMUST00000228153 787 ntBASIC17.36■□□□□ 0.37
Abcf1Q6P542 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Abcf1Q6P542 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Abcf1Q6P542 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Abcf1Q6P542 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Abcf1Q6P542 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Abcf1Q6P542 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC17.36■□□□□ 0.37
Abcf1Q6P542 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Abcf1Q6P542 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Abcf1Q6P542 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Abcf1Q6P542 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Abcf1Q6P542 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Abcf1Q6P542 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Abcf1Q6P542 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
Abcf1Q6P542 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Abcf1Q6P542 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC17.35■□□□□ 0.37
Abcf1Q6P542 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC17.35■□□□□ 0.37
Abcf1Q6P542 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Abcf1Q6P542 Gm37736-201ENSMUST00000193564 2802 ntBASIC17.35■□□□□ 0.37
Abcf1Q6P542 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Abcf1Q6P542 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Abcf1Q6P542 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Abcf1Q6P542 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Abcf1Q6P542 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Abcf1Q6P542 Gm9103-201ENSMUST00000119371 405 ntBASIC17.35■□□□□ 0.37
Abcf1Q6P542 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.35■□□□□ 0.37
Abcf1Q6P542 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Abcf1Q6P542 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Abcf1Q6P542 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Abcf1Q6P542 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Abcf1Q6P542 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Abcf1Q6P542 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Abcf1Q6P542 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Abcf1Q6P542 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Abcf1Q6P542 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Abcf1Q6P542 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC17.35■□□□□ 0.37
Abcf1Q6P542 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Abcf1Q6P542 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Abcf1Q6P542 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Abcf1Q6P542 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Abcf1Q6P542 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Abcf1Q6P542 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Abcf1Q6P542 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Abcf1Q6P542 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Abcf1Q6P542 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Abcf1Q6P542 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Abcf1Q6P542 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC17.34■□□□□ 0.37
Abcf1Q6P542 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Abcf1Q6P542 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Abcf1Q6P542 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Abcf1Q6P542 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC17.34■□□□□ 0.37
Abcf1Q6P542 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.34■□□□□ 0.37
Abcf1Q6P542 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Abcf1Q6P542 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Abcf1Q6P542 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms