Protein–RNA interactions for Protein: Q6IRU2

Tpm4, Tropomyosin alpha-4 chain, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm4Q6IRU2 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC17.36■□□□□ 0.37
Tpm4Q6IRU2 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC17.36■□□□□ 0.37
Tpm4Q6IRU2 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Tpm4Q6IRU2 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tpm4Q6IRU2 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tpm4Q6IRU2 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tpm4Q6IRU2 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tpm4Q6IRU2 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tpm4Q6IRU2 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Tpm4Q6IRU2 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Tpm4Q6IRU2 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tpm4Q6IRU2 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tpm4Q6IRU2 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Tpm4Q6IRU2 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Tpm4Q6IRU2 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tpm4Q6IRU2 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.35■□□□□ 0.37
Tpm4Q6IRU2 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Tpm4Q6IRU2 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tpm4Q6IRU2 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tpm4Q6IRU2 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tpm4Q6IRU2 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Tpm4Q6IRU2 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Tpm4Q6IRU2 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tpm4Q6IRU2 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tpm4Q6IRU2 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tpm4Q6IRU2 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Tpm4Q6IRU2 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Tpm4Q6IRU2 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tpm4Q6IRU2 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tpm4Q6IRU2 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tpm4Q6IRU2 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Tpm4Q6IRU2 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tpm4Q6IRU2 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC17.34■□□□□ 0.37
Tpm4Q6IRU2 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tpm4Q6IRU2 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tpm4Q6IRU2 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Tpm4Q6IRU2 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tpm4Q6IRU2 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Tpm4Q6IRU2 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Tpm4Q6IRU2 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Tpm4Q6IRU2 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Tpm4Q6IRU2 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Tpm4Q6IRU2 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.34■□□□□ 0.37
Tpm4Q6IRU2 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC17.34■□□□□ 0.37
Tpm4Q6IRU2 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Tpm4Q6IRU2 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
Tpm4Q6IRU2 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tpm4Q6IRU2 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tpm4Q6IRU2 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tpm4Q6IRU2 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tpm4Q6IRU2 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tpm4Q6IRU2 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tpm4Q6IRU2 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
Tpm4Q6IRU2 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Tpm4Q6IRU2 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC17.33■□□□□ 0.37
Tpm4Q6IRU2 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Tpm4Q6IRU2 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tpm4Q6IRU2 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tpm4Q6IRU2 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.37
Tpm4Q6IRU2 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.33■□□□□ 0.37
Tpm4Q6IRU2 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Tpm4Q6IRU2 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC17.33■□□□□ 0.37
Tpm4Q6IRU2 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC17.33■□□□□ 0.36
Tpm4Q6IRU2 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Tpm4Q6IRU2 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tpm4Q6IRU2 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Tpm4Q6IRU2 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tpm4Q6IRU2 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Tpm4Q6IRU2 Gm9987-201ENSMUST00000069768 567 ntBASIC17.33■□□□□ 0.36
Tpm4Q6IRU2 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Tpm4Q6IRU2 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Tpm4Q6IRU2 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC17.33■□□□□ 0.36
Tpm4Q6IRU2 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Tpm4Q6IRU2 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tpm4Q6IRU2 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tpm4Q6IRU2 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC17.33■□□□□ 0.36
Tpm4Q6IRU2 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tpm4Q6IRU2 Gm38058-201ENSMUST00000194323 4368 ntBASIC17.33■□□□□ 0.36
Tpm4Q6IRU2 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tpm4Q6IRU2 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tpm4Q6IRU2 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Tpm4Q6IRU2 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tpm4Q6IRU2 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Tpm4Q6IRU2 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tpm4Q6IRU2 Gm6257-201ENSMUST00000163864 910 ntBASIC17.32■□□□□ 0.36
Tpm4Q6IRU2 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Tpm4Q6IRU2 Mir6404-201ENSMUST00000183699 94 ntBASIC17.32■□□□□ 0.36
Tpm4Q6IRU2 Gm10252-201ENSMUST00000209541 832 ntBASIC17.32■□□□□ 0.36
Tpm4Q6IRU2 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
Tpm4Q6IRU2 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tpm4Q6IRU2 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Tpm4Q6IRU2 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tpm4Q6IRU2 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tpm4Q6IRU2 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Tpm4Q6IRU2 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tpm4Q6IRU2 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Tpm4Q6IRU2 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Tpm4Q6IRU2 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC17.32■□□□□ 0.36
Tpm4Q6IRU2 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tpm4Q6IRU2 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 75.5 ms