Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col11a2Q64739 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col11a2Q64739 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col11a2Q64739 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Col11a2Q64739 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col11a2Q64739 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col11a2Q64739 Gm6756-201ENSMUST00000180647 1620 ntBASIC18.52■□□□□ 0.55
Col11a2Q64739 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Col11a2Q64739 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.52■□□□□ 0.55
Col11a2Q64739 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Col11a2Q64739 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Col11a2Q64739 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Col11a2Q64739 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC18.52■□□□□ 0.55
Col11a2Q64739 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
Col11a2Q64739 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Col11a2Q64739 AC069562.2-201ENSMUST00000224644 2146 ntBASIC18.52■□□□□ 0.55
Col11a2Q64739 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Col11a2Q64739 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Col11a2Q64739 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col11a2Q64739 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col11a2Q64739 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col11a2Q64739 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.51■□□□□ 0.55
Col11a2Q64739 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC18.51■□□□□ 0.55
Col11a2Q64739 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC18.51■□□□□ 0.55
Col11a2Q64739 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col11a2Q64739 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC18.51■□□□□ 0.55
Col11a2Q64739 Gm12091-201ENSMUST00000146791 830 ntBASIC18.51■□□□□ 0.55
Col11a2Q64739 Gm45195-201ENSMUST00000205597 1008 ntBASIC18.51■□□□□ 0.55
Col11a2Q64739 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col11a2Q64739 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col11a2Q64739 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col11a2Q64739 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col11a2Q64739 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Col11a2Q64739 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col11a2Q64739 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col11a2Q64739 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col11a2Q64739 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col11a2Q64739 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Col11a2Q64739 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC18.5■□□□□ 0.55
Col11a2Q64739 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col11a2Q64739 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col11a2Q64739 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Col11a2Q64739 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col11a2Q64739 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col11a2Q64739 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC18.5■□□□□ 0.55
Col11a2Q64739 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC18.5■□□□□ 0.55
Col11a2Q64739 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Col11a2Q64739 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col11a2Q64739 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col11a2Q64739 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col11a2Q64739 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col11a2Q64739 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col11a2Q64739 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col11a2Q64739 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Col11a2Q64739 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col11a2Q64739 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col11a2Q64739 Gm18018-201ENSMUST00000198273 408 ntBASIC18.49■□□□□ 0.55
Col11a2Q64739 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC18.49■□□□□ 0.55
Col11a2Q64739 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col11a2Q64739 Gm45668-201ENSMUST00000211271 493 ntBASIC18.49■□□□□ 0.55
Col11a2Q64739 AC149588.3-201ENSMUST00000227515 150 ntBASIC18.49■□□□□ 0.55
Col11a2Q64739 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col11a2Q64739 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC18.49■□□□□ 0.55
Col11a2Q64739 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col11a2Q64739 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Col11a2Q64739 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Col11a2Q64739 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col11a2Q64739 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Col11a2Q64739 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Col11a2Q64739 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Col11a2Q64739 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col11a2Q64739 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC18.49■□□□□ 0.55
Col11a2Q64739 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Col11a2Q64739 Gm11478-201ENSMUST00000117851 599 ntBASIC18.49■□□□□ 0.55
Col11a2Q64739 Gm5479-201ENSMUST00000160578 435 ntBASIC18.49■□□□□ 0.55
Col11a2Q64739 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Col11a2Q64739 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC18.49■□□□□ 0.55
Col11a2Q64739 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col11a2Q64739 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col11a2Q64739 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Col11a2Q64739 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col11a2Q64739 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Col11a2Q64739 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col11a2Q64739 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Col11a2Q64739 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col11a2Q64739 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Col11a2Q64739 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Col11a2Q64739 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Col11a2Q64739 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col11a2Q64739 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col11a2Q64739 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col11a2Q64739 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC18.48■□□□□ 0.55
Col11a2Q64739 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col11a2Q64739 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Col11a2Q64739 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC18.48■□□□□ 0.55
Col11a2Q64739 Gm20445-201ENSMUST00000061905 565 ntBASIC18.48■□□□□ 0.55
Col11a2Q64739 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col11a2Q64739 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC18.48■□□□□ 0.55
Col11a2Q64739 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col11a2Q64739 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms