Protein–RNA interactions for Protein: Q640N4

Zfp248, Zinc finger protein 248, mousemouse

Predictions only

Length 576 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp248Q640N4 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Zfp248Q640N4 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Zfp248Q640N4 AC153794.1-201ENSMUST00000169148 126 ntBASIC11.81□□□□□ -0.52
Zfp248Q640N4 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Zfp248Q640N4 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Zfp248Q640N4 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Zfp248Q640N4 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Zfp248Q640N4 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Zfp248Q640N4 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Zfp248Q640N4 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Zfp248Q640N4 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Zfp248Q640N4 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Zfp248Q640N4 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Zfp248Q640N4 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Zfp248Q640N4 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Zfp248Q640N4 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Zfp248Q640N4 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Zfp248Q640N4 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Zfp248Q640N4 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Zfp248Q640N4 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Zfp248Q640N4 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Zfp248Q640N4 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Zfp248Q640N4 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Zfp248Q640N4 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Zfp248Q640N4 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Zfp248Q640N4 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Zfp248Q640N4 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Zfp248Q640N4 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Zfp248Q640N4 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Zfp248Q640N4 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Zfp248Q640N4 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Zfp248Q640N4 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Zfp248Q640N4 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Zfp248Q640N4 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Zfp248Q640N4 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Zfp248Q640N4 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Zfp248Q640N4 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Zfp248Q640N4 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Zfp248Q640N4 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC11.8□□□□□ -0.52
Zfp248Q640N4 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
Zfp248Q640N4 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Zfp248Q640N4 AC127302.2-201ENSMUST00000215212 268 ntBASIC11.8□□□□□ -0.52
Zfp248Q640N4 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Zfp248Q640N4 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Zfp248Q640N4 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC11.8□□□□□ -0.52
Zfp248Q640N4 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Zfp248Q640N4 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Zfp248Q640N4 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Zfp248Q640N4 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC11.8□□□□□ -0.52
Zfp248Q640N4 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Zfp248Q640N4 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
Zfp248Q640N4 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC11.8□□□□□ -0.52
Zfp248Q640N4 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Zfp248Q640N4 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Zfp248Q640N4 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Zfp248Q640N4 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC11.8□□□□□ -0.52
Zfp248Q640N4 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Zfp248Q640N4 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Zfp248Q640N4 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Zfp248Q640N4 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Zfp248Q640N4 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Zfp248Q640N4 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Zfp248Q640N4 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
Zfp248Q640N4 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Zfp248Q640N4 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Zfp248Q640N4 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Zfp248Q640N4 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Zfp248Q640N4 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Zfp248Q640N4 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Zfp248Q640N4 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Zfp248Q640N4 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Zfp248Q640N4 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
Zfp248Q640N4 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Zfp248Q640N4 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC11.79□□□□□ -0.52
Zfp248Q640N4 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC11.79□□□□□ -0.52
Zfp248Q640N4 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC11.79□□□□□ -0.52
Zfp248Q640N4 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Zfp248Q640N4 Gm8349-201ENSMUST00000182720 1003 ntBASIC11.79□□□□□ -0.52
Zfp248Q640N4 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC11.79□□□□□ -0.52
Zfp248Q640N4 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Zfp248Q640N4 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Zfp248Q640N4 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Zfp248Q640N4 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Zfp248Q640N4 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Zfp248Q640N4 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Zfp248Q640N4 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Zfp248Q640N4 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Zfp248Q640N4 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Zfp248Q640N4 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Zfp248Q640N4 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Zfp248Q640N4 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Zfp248Q640N4 Gm7669-201ENSMUST00000210184 1603 ntBASIC11.78□□□□□ -0.52
Zfp248Q640N4 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Zfp248Q640N4 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Zfp248Q640N4 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Zfp248Q640N4 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Zfp248Q640N4 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC11.78□□□□□ -0.52
Zfp248Q640N4 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Zfp248Q640N4 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Zfp248Q640N4 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms