Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Scn9aQ62205 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Scn9aQ62205 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Scn9aQ62205 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Scn9aQ62205 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Scn9aQ62205 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Scn9aQ62205 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Scn9aQ62205 Gm12859-201ENSMUST00000117834 427 ntBASIC18.04■□□□□ 0.48
Scn9aQ62205 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC18.04■□□□□ 0.48
Scn9aQ62205 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC18.04■□□□□ 0.48
Scn9aQ62205 Gm15483-201ENSMUST00000120338 456 ntBASIC18.04■□□□□ 0.48
Scn9aQ62205 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
Scn9aQ62205 Gm27838-201ENSMUST00000184829 128 ntBASIC18.04■□□□□ 0.48
Scn9aQ62205 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Scn9aQ62205 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Scn9aQ62205 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Scn9aQ62205 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Scn9aQ62205 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Scn9aQ62205 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Scn9aQ62205 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Scn9aQ62205 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Scn9aQ62205 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Scn9aQ62205 Gm6218-201ENSMUST00000219812 628 ntBASIC18.04■□□□□ 0.48
Scn9aQ62205 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Scn9aQ62205 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Scn9aQ62205 Gm5357-201ENSMUST00000212720 1924 ntBASIC18.04■□□□□ 0.48
Scn9aQ62205 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Scn9aQ62205 Gm43072-201ENSMUST00000200283 1671 ntBASIC18.03■□□□□ 0.48
Scn9aQ62205 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Scn9aQ62205 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
Scn9aQ62205 Gm15163-201ENSMUST00000120749 1302 ntBASIC18.03■□□□□ 0.48
Scn9aQ62205 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Scn9aQ62205 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Scn9aQ62205 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC18.03■□□□□ 0.48
Scn9aQ62205 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Scn9aQ62205 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC18.03■□□□□ 0.48
Scn9aQ62205 AC125350.2-201ENSMUST00000224737 727 ntBASIC18.03■□□□□ 0.48
Scn9aQ62205 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Scn9aQ62205 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Scn9aQ62205 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC18.03■□□□□ 0.48
Scn9aQ62205 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Scn9aQ62205 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC18.03■□□□□ 0.48
Scn9aQ62205 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Scn9aQ62205 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Scn9aQ62205 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Scn9aQ62205 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Scn9aQ62205 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Scn9aQ62205 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Scn9aQ62205 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Scn9aQ62205 Gm22189-201ENSMUST00000103822 86 ntBASIC18.02■□□□□ 0.48
Scn9aQ62205 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Scn9aQ62205 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC18.02■□□□□ 0.48
Scn9aQ62205 Gm45059-201ENSMUST00000205558 1077 ntBASIC18.02■□□□□ 0.48
Scn9aQ62205 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC18.02■□□□□ 0.48
Scn9aQ62205 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Scn9aQ62205 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Scn9aQ62205 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Scn9aQ62205 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Scn9aQ62205 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Scn9aQ62205 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Scn9aQ62205 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Scn9aQ62205 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
Scn9aQ62205 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC18.02■□□□□ 0.48
Scn9aQ62205 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Scn9aQ62205 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Scn9aQ62205 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Scn9aQ62205 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC18.02■□□□□ 0.48
Scn9aQ62205 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Scn9aQ62205 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Scn9aQ62205 Gm29667-201ENSMUST00000190817 490 ntBASIC18.02■□□□□ 0.47
Scn9aQ62205 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC18.02■□□□□ 0.47
Scn9aQ62205 AC154239.3-201ENSMUST00000226933 674 ntBASIC18.02■□□□□ 0.47
Scn9aQ62205 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Scn9aQ62205 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Scn9aQ62205 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC18.02■□□□□ 0.47
Scn9aQ62205 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Scn9aQ62205 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Scn9aQ62205 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Scn9aQ62205 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.01■□□□□ 0.47
Scn9aQ62205 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Scn9aQ62205 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Scn9aQ62205 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Scn9aQ62205 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Scn9aQ62205 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Scn9aQ62205 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Scn9aQ62205 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC18.01■□□□□ 0.47
Scn9aQ62205 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Scn9aQ62205 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC18.01■□□□□ 0.47
Scn9aQ62205 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Scn9aQ62205 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC18.01■□□□□ 0.47
Scn9aQ62205 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Scn9aQ62205 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Scn9aQ62205 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Scn9aQ62205 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Scn9aQ62205 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.01■□□□□ 0.47
Scn9aQ62205 Gm42473-201ENSMUST00000201056 2291 ntBASIC18.01■□□□□ 0.47
Scn9aQ62205 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Scn9aQ62205 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Scn9aQ62205 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Scn9aQ62205 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms