Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VcanQ62059 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VcanQ62059 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
VcanQ62059 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VcanQ62059 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VcanQ62059 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
VcanQ62059 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC14.42□□□□□ -0.1
VcanQ62059 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
VcanQ62059 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VcanQ62059 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VcanQ62059 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VcanQ62059 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC14.41□□□□□ -0.1
VcanQ62059 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.41□□□□□ -0.1
VcanQ62059 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VcanQ62059 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VcanQ62059 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC14.41□□□□□ -0.1
VcanQ62059 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
VcanQ62059 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
VcanQ62059 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC14.41□□□□□ -0.1
VcanQ62059 Haglr-201ENSMUST00000100000 2085 ntBASIC14.41□□□□□ -0.1
VcanQ62059 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VcanQ62059 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VcanQ62059 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
VcanQ62059 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VcanQ62059 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VcanQ62059 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VcanQ62059 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VcanQ62059 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
VcanQ62059 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VcanQ62059 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VcanQ62059 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VcanQ62059 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VcanQ62059 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC14.41□□□□□ -0.1
VcanQ62059 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
VcanQ62059 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.4□□□□□ -0.1
VcanQ62059 Gm13392-201ENSMUST00000117708 150 ntBASIC14.4□□□□□ -0.1
VcanQ62059 Gm38225-201ENSMUST00000194001 393 ntBASIC14.4□□□□□ -0.1
VcanQ62059 CT485787.1-201ENSMUST00000225617 968 ntBASIC14.4□□□□□ -0.1
VcanQ62059 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
VcanQ62059 Gm9200-201ENSMUST00000118513 1354 ntBASIC14.4□□□□□ -0.1
VcanQ62059 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VcanQ62059 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
VcanQ62059 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
VcanQ62059 Gm12008-201ENSMUST00000117791 755 ntBASIC14.4□□□□□ -0.1
VcanQ62059 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
VcanQ62059 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VcanQ62059 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
VcanQ62059 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VcanQ62059 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
VcanQ62059 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
VcanQ62059 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
VcanQ62059 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.4□□□□□ -0.1
VcanQ62059 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
VcanQ62059 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VcanQ62059 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VcanQ62059 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
VcanQ62059 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.4□□□□□ -0.1
VcanQ62059 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VcanQ62059 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
VcanQ62059 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC14.39□□□□□ -0.11
VcanQ62059 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC14.39□□□□□ -0.11
VcanQ62059 AC154171.1-201ENSMUST00000224610 643 ntBASIC14.39□□□□□ -0.11
VcanQ62059 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VcanQ62059 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VcanQ62059 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
VcanQ62059 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
VcanQ62059 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VcanQ62059 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
VcanQ62059 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
VcanQ62059 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
VcanQ62059 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VcanQ62059 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VcanQ62059 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
VcanQ62059 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VcanQ62059 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
VcanQ62059 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VcanQ62059 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
VcanQ62059 Gm6539-201ENSMUST00000119157 1064 ntBASIC14.39□□□□□ -0.11
VcanQ62059 Gm8062-201ENSMUST00000139696 444 ntBASIC14.39□□□□□ -0.11
VcanQ62059 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.39□□□□□ -0.11
VcanQ62059 Gm10478-201ENSMUST00000084451 396 ntBASIC14.39□□□□□ -0.11
VcanQ62059 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VcanQ62059 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VcanQ62059 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VcanQ62059 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VcanQ62059 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC14.38□□□□□ -0.11
VcanQ62059 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
VcanQ62059 Gm44344-201ENSMUST00000200287 129 ntBASIC14.38□□□□□ -0.11
VcanQ62059 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
VcanQ62059 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
VcanQ62059 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VcanQ62059 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC14.38□□□□□ -0.11
VcanQ62059 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
VcanQ62059 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC14.38□□□□□ -0.11
VcanQ62059 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VcanQ62059 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
VcanQ62059 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VcanQ62059 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.38□□□□□ -0.11
VcanQ62059 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VcanQ62059 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms