Protein–RNA interactions for Protein: Q61457

Ccne1, G1/S-specific cyclin-E1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccne1Q61457 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Ccne1Q61457 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ccne1Q61457 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Ccne1Q61457 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC20.07■□□□□ 0.8
Ccne1Q61457 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ccne1Q61457 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ccne1Q61457 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC20.07■□□□□ 0.8
Ccne1Q61457 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Ccne1Q61457 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC20.07■□□□□ 0.8
Ccne1Q61457 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC20.07■□□□□ 0.8
Ccne1Q61457 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ccne1Q61457 CT030684.1-201ENSMUST00000227292 914 ntBASIC20.07■□□□□ 0.8
Ccne1Q61457 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ccne1Q61457 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ccne1Q61457 Shroom3-211ENSMUST00000225438 5742 ntBASIC20.07■□□□□ 0.8
Ccne1Q61457 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ccne1Q61457 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ccne1Q61457 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccne1Q61457 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccne1Q61457 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccne1Q61457 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Ccne1Q61457 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccne1Q61457 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccne1Q61457 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Ccne1Q61457 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccne1Q61457 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC20.06■□□□□ 0.8
Ccne1Q61457 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccne1Q61457 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC20.06■□□□□ 0.8
Ccne1Q61457 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC20.06■□□□□ 0.8
Ccne1Q61457 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccne1Q61457 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccne1Q61457 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Ccne1Q61457 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccne1Q61457 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
Ccne1Q61457 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccne1Q61457 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
Ccne1Q61457 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccne1Q61457 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccne1Q61457 Gm20628-201ENSMUST00000177363 3215 ntBASIC20.05■□□□□ 0.8
Ccne1Q61457 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccne1Q61457 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccne1Q61457 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccne1Q61457 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC20.05■□□□□ 0.8
Ccne1Q61457 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
Ccne1Q61457 Gm22175-201ENSMUST00000175007 78 ntBASIC20.05■□□□□ 0.8
Ccne1Q61457 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Ccne1Q61457 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ccne1Q61457 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccne1Q61457 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccne1Q61457 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ccne1Q61457 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Ccne1Q61457 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccne1Q61457 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccne1Q61457 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccne1Q61457 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccne1Q61457 Gm43548-201ENSMUST00000197139 2353 ntBASIC20.04■□□□□ 0.8
Ccne1Q61457 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC20.04■□□□□ 0.8
Ccne1Q61457 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC20.04■□□□□ 0.8
Ccne1Q61457 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Ccne1Q61457 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC20.04■□□□□ 0.8
Ccne1Q61457 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
Ccne1Q61457 Gm27321-201ENSMUST00000185021 205 ntBASIC20.04■□□□□ 0.8
Ccne1Q61457 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Ccne1Q61457 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ccne1Q61457 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC20.04■□□□□ 0.8
Ccne1Q61457 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccne1Q61457 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
Ccne1Q61457 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccne1Q61457 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC20.04■□□□□ 0.8
Ccne1Q61457 Gm26917-202ENSMUST00000192833 3329 ntBASIC20.04■□□□□ 0.8
Ccne1Q61457 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccne1Q61457 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccne1Q61457 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC20.03■□□□□ 0.8
Ccne1Q61457 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccne1Q61457 Gm22065-201ENSMUST00000103753 110 ntBASIC20.03■□□□□ 0.8
Ccne1Q61457 Gm22066-201ENSMUST00000103761 110 ntBASIC20.03■□□□□ 0.8
Ccne1Q61457 Gm24932-201ENSMUST00000103763 110 ntBASIC20.03■□□□□ 0.8
Ccne1Q61457 Gm24115-201ENSMUST00000103799 110 ntBASIC20.03■□□□□ 0.8
Ccne1Q61457 Gm22190-201ENSMUST00000103827 110 ntBASIC20.03■□□□□ 0.8
Ccne1Q61457 Gm22191-201ENSMUST00000103831 110 ntBASIC20.03■□□□□ 0.8
Ccne1Q61457 Gm24721-201ENSMUST00000103849 110 ntBASIC20.03■□□□□ 0.8
Ccne1Q61457 Gm28018-201ENSMUST00000103869 110 ntBASIC20.03■□□□□ 0.8
Ccne1Q61457 Gm26399-201ENSMUST00000103937 110 ntBASIC20.03■□□□□ 0.8
Ccne1Q61457 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Ccne1Q61457 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccne1Q61457 Gm25349-201ENSMUST00000177728 110 ntBASIC20.03■□□□□ 0.8
Ccne1Q61457 Gm23616-201ENSMUST00000177797 110 ntBASIC20.03■□□□□ 0.8
Ccne1Q61457 Gm25871-201ENSMUST00000177816 110 ntBASIC20.03■□□□□ 0.8
Ccne1Q61457 Gm24752-201ENSMUST00000178240 110 ntBASIC20.03■□□□□ 0.8
Ccne1Q61457 Gm24496-201ENSMUST00000178287 110 ntBASIC20.03■□□□□ 0.8
Ccne1Q61457 Gm25649-201ENSMUST00000178476 110 ntBASIC20.03■□□□□ 0.8
Ccne1Q61457 Gm25548-201ENSMUST00000178681 110 ntBASIC20.03■□□□□ 0.8
Ccne1Q61457 Gm23147-201ENSMUST00000178841 110 ntBASIC20.03■□□□□ 0.8
Ccne1Q61457 Gm26095-201ENSMUST00000179270 110 ntBASIC20.03■□□□□ 0.8
Ccne1Q61457 Gm22171-201ENSMUST00000179283 110 ntBASIC20.03■□□□□ 0.8
Ccne1Q61457 Gm23936-201ENSMUST00000179354 110 ntBASIC20.03■□□□□ 0.8
Ccne1Q61457 Gm22619-201ENSMUST00000179516 110 ntBASIC20.03■□□□□ 0.8
Ccne1Q61457 Gm25255-201ENSMUST00000179579 110 ntBASIC20.03■□□□□ 0.8
Ccne1Q61457 Gm24755-201ENSMUST00000179691 110 ntBASIC20.03■□□□□ 0.8
Ccne1Q61457 Gm26506-201ENSMUST00000179692 110 ntBASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms