Protein–RNA interactions for Protein: Q61451

Cd53, Leukocyte surface antigen CD53, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd53Q61451 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cd53Q61451 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC14.3□□□□□ -0.12
Cd53Q61451 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cd53Q61451 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd53Q61451 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Cd53Q61451 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.29□□□□□ -0.12
Cd53Q61451 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd53Q61451 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd53Q61451 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.29□□□□□ -0.12
Cd53Q61451 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cd53Q61451 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd53Q61451 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd53Q61451 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Cd53Q61451 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd53Q61451 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd53Q61451 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Cd53Q61451 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Cd53Q61451 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Cd53Q61451 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd53Q61451 Gm6257-201ENSMUST00000163864 910 ntBASIC14.29□□□□□ -0.12
Cd53Q61451 Gm43347-201ENSMUST00000200226 580 ntBASIC14.29□□□□□ -0.12
Cd53Q61451 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC14.29□□□□□ -0.12
Cd53Q61451 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cd53Q61451 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC14.29□□□□□ -0.12
Cd53Q61451 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd53Q61451 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC14.29□□□□□ -0.12
Cd53Q61451 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd53Q61451 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Cd53Q61451 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.29□□□□□ -0.12
Cd53Q61451 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cd53Q61451 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd53Q61451 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd53Q61451 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd53Q61451 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd53Q61451 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd53Q61451 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.29□□□□□ -0.12
Cd53Q61451 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd53Q61451 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Cd53Q61451 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd53Q61451 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd53Q61451 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd53Q61451 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cd53Q61451 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cd53Q61451 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cd53Q61451 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cd53Q61451 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cd53Q61451 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cd53Q61451 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cd53Q61451 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cd53Q61451 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Cd53Q61451 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cd53Q61451 Mir6404-201ENSMUST00000183699 94 ntBASIC14.28□□□□□ -0.12
Cd53Q61451 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC14.28□□□□□ -0.12
Cd53Q61451 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cd53Q61451 Gm44430-201ENSMUST00000203376 995 ntBASIC14.28□□□□□ -0.12
Cd53Q61451 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC14.28□□□□□ -0.12
Cd53Q61451 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cd53Q61451 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Cd53Q61451 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cd53Q61451 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.28□□□□□ -0.12
Cd53Q61451 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cd53Q61451 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Cd53Q61451 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cd53Q61451 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cd53Q61451 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cd53Q61451 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
Cd53Q61451 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cd53Q61451 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Cd53Q61451 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cd53Q61451 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cd53Q61451 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cd53Q61451 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.27□□□□□ -0.12
Cd53Q61451 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cd53Q61451 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cd53Q61451 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cd53Q61451 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Cd53Q61451 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cd53Q61451 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cd53Q61451 Gm9889-202ENSMUST00000206983 1577 ntBASIC14.27□□□□□ -0.12
Cd53Q61451 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cd53Q61451 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cd53Q61451 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cd53Q61451 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Cd53Q61451 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cd53Q61451 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cd53Q61451 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC14.27□□□□□ -0.13
Cd53Q61451 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cd53Q61451 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cd53Q61451 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC14.27□□□□□ -0.13
Cd53Q61451 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC14.27□□□□□ -0.13
Cd53Q61451 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cd53Q61451 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cd53Q61451 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cd53Q61451 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Cd53Q61451 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
Cd53Q61451 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Cd53Q61451 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Cd53Q61451 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cd53Q61451 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.27□□□□□ -0.13
Cd53Q61451 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms