Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clns1aQ61189 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Clns1aQ61189 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clns1aQ61189 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clns1aQ61189 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clns1aQ61189 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
Clns1aQ61189 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Clns1aQ61189 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Clns1aQ61189 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Clns1aQ61189 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clns1aQ61189 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Clns1aQ61189 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC13.28□□□□□ -0.28
Clns1aQ61189 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC13.28□□□□□ -0.28
Clns1aQ61189 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC13.28□□□□□ -0.28
Clns1aQ61189 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC13.28□□□□□ -0.28
Clns1aQ61189 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Clns1aQ61189 Otx2os1-204ENSMUST00000227221 751 ntBASIC13.28□□□□□ -0.28
Clns1aQ61189 AC135637.1-201ENSMUST00000227750 365 ntBASIC13.28□□□□□ -0.28
Clns1aQ61189 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clns1aQ61189 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clns1aQ61189 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clns1aQ61189 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Clns1aQ61189 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clns1aQ61189 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC13.28□□□□□ -0.28
Clns1aQ61189 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC13.28□□□□□ -0.28
Clns1aQ61189 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clns1aQ61189 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clns1aQ61189 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clns1aQ61189 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clns1aQ61189 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Clns1aQ61189 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clns1aQ61189 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clns1aQ61189 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clns1aQ61189 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.28□□□□□ -0.28
Clns1aQ61189 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Clns1aQ61189 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Clns1aQ61189 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Clns1aQ61189 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Clns1aQ61189 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Clns1aQ61189 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Clns1aQ61189 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Clns1aQ61189 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.27□□□□□ -0.28
Clns1aQ61189 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Clns1aQ61189 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Clns1aQ61189 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Clns1aQ61189 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Clns1aQ61189 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Clns1aQ61189 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Clns1aQ61189 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Clns1aQ61189 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Clns1aQ61189 Gm27463-201ENSMUST00000183569 57 ntBASIC13.27□□□□□ -0.29
Clns1aQ61189 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Clns1aQ61189 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC13.27□□□□□ -0.29
Clns1aQ61189 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Clns1aQ61189 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.29
Clns1aQ61189 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Clns1aQ61189 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Clns1aQ61189 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Clns1aQ61189 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Clns1aQ61189 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Clns1aQ61189 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Clns1aQ61189 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Clns1aQ61189 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Clns1aQ61189 AC132265.1-201ENSMUST00000219233 1665 ntBASIC13.27□□□□□ -0.29
Clns1aQ61189 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC13.27□□□□□ -0.29
Clns1aQ61189 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC13.27□□□□□ -0.29
Clns1aQ61189 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Clns1aQ61189 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Clns1aQ61189 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Clns1aQ61189 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC13.27□□□□□ -0.29
Clns1aQ61189 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Clns1aQ61189 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Clns1aQ61189 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Clns1aQ61189 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Clns1aQ61189 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC13.27□□□□□ -0.29
Clns1aQ61189 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Clns1aQ61189 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Clns1aQ61189 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clns1aQ61189 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clns1aQ61189 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Clns1aQ61189 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Clns1aQ61189 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Clns1aQ61189 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Clns1aQ61189 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Clns1aQ61189 Gm11839-201ENSMUST00000120647 1953 ntBASIC13.26□□□□□ -0.29
Clns1aQ61189 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Clns1aQ61189 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Clns1aQ61189 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Clns1aQ61189 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clns1aQ61189 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clns1aQ61189 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC13.26□□□□□ -0.29
Clns1aQ61189 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clns1aQ61189 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC13.26□□□□□ -0.29
Clns1aQ61189 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clns1aQ61189 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.26□□□□□ -0.29
Clns1aQ61189 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clns1aQ61189 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clns1aQ61189 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clns1aQ61189 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Clns1aQ61189 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms