Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ptch1Q61115 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ptch1Q61115 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Ptch1Q61115 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ptch1Q61115 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
Ptch1Q61115 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Ptch1Q61115 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Ptch1Q61115 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC22.08■■□□□ 1.13
Ptch1Q61115 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC22.08■■□□□ 1.13
Ptch1Q61115 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
Ptch1Q61115 AC164567.1-201ENSMUST00000219185 960 ntBASIC22.08■■□□□ 1.13
Ptch1Q61115 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC22.08■■□□□ 1.13
Ptch1Q61115 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Ptch1Q61115 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Ptch1Q61115 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC22.08■■□□□ 1.12
Ptch1Q61115 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
Ptch1Q61115 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.12
Ptch1Q61115 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
Ptch1Q61115 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Ptch1Q61115 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Ptch1Q61115 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.12
Ptch1Q61115 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ptch1Q61115 Gm28265-201ENSMUST00000188201 2319 ntBASIC22.07■■□□□ 1.12
Ptch1Q61115 Gm6266-201ENSMUST00000203844 806 ntBASIC22.07■■□□□ 1.12
Ptch1Q61115 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ptch1Q61115 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ptch1Q61115 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ptch1Q61115 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ptch1Q61115 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC22.07■■□□□ 1.12
Ptch1Q61115 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ptch1Q61115 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ptch1Q61115 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC22.07■■□□□ 1.12
Ptch1Q61115 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
Ptch1Q61115 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ptch1Q61115 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Ptch1Q61115 Mir1897-201ENSMUST00000122581 272 ntBASIC22.06■■□□□ 1.12
Ptch1Q61115 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Ptch1Q61115 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Ptch1Q61115 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC22.06■■□□□ 1.12
Ptch1Q61115 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Ptch1Q61115 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ptch1Q61115 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Ptch1Q61115 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ptch1Q61115 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ptch1Q61115 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
Ptch1Q61115 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC22.06■■□□□ 1.12
Ptch1Q61115 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC22.06■■□□□ 1.12
Ptch1Q61115 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
Ptch1Q61115 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ptch1Q61115 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC22.06■■□□□ 1.12
Ptch1Q61115 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ptch1Q61115 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Ptch1Q61115 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ptch1Q61115 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC22.06■■□□□ 1.12
Ptch1Q61115 Gm8131-201ENSMUST00000213783 1570 ntBASIC22.06■■□□□ 1.12
Ptch1Q61115 Rassf8-202ENSMUST00000058538 1131 ntBASIC22.06■■□□□ 1.12
Ptch1Q61115 Gm15823-201ENSMUST00000064305 670 ntBASIC22.06■■□□□ 1.12
Ptch1Q61115 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ptch1Q61115 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC22.06■■□□□ 1.12
Ptch1Q61115 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ptch1Q61115 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ptch1Q61115 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ptch1Q61115 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ptch1Q61115 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC22.05■■□□□ 1.12
Ptch1Q61115 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ptch1Q61115 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
Ptch1Q61115 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC22.05■■□□□ 1.12
Ptch1Q61115 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC22.05■■□□□ 1.12
Ptch1Q61115 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC22.05■■□□□ 1.12
Ptch1Q61115 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ptch1Q61115 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC22.05■■□□□ 1.12
Ptch1Q61115 Gm46209-201ENSMUST00000217912 553 ntBASIC22.05■■□□□ 1.12
Ptch1Q61115 Dupd1-202ENSMUST00000224735 548 ntBASIC22.05■■□□□ 1.12
Ptch1Q61115 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ptch1Q61115 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ptch1Q61115 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Ptch1Q61115 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Ptch1Q61115 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ptch1Q61115 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
Ptch1Q61115 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ptch1Q61115 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ptch1Q61115 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ptch1Q61115 AC069562.2-201ENSMUST00000224644 2146 ntBASIC22.04■■□□□ 1.12
Ptch1Q61115 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ptch1Q61115 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ptch1Q61115 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
Ptch1Q61115 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
Ptch1Q61115 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Ptch1Q61115 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ptch1Q61115 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
Ptch1Q61115 Gm43702-201ENSMUST00000198772 2546 ntBASIC22.04■■□□□ 1.12
Ptch1Q61115 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
Ptch1Q61115 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC22.04■■□□□ 1.12
Ptch1Q61115 AC153962.4-201ENSMUST00000217878 242 ntBASIC22.04■■□□□ 1.12
Ptch1Q61115 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
Ptch1Q61115 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ptch1Q61115 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ptch1Q61115 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Ptch1Q61115 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ptch1Q61115 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms