Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col12a1Q60847 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col12a1Q60847 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col12a1Q60847 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col12a1Q60847 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Col12a1Q60847 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC15.13■□□□□ 0.01
Col12a1Q60847 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col12a1Q60847 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC15.13■□□□□ 0.01
Col12a1Q60847 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col12a1Q60847 Gm5320-201ENSMUST00000207163 1519 ntBASIC15.13■□□□□ 0.01
Col12a1Q60847 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col12a1Q60847 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col12a1Q60847 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col12a1Q60847 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col12a1Q60847 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col12a1Q60847 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col12a1Q60847 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col12a1Q60847 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Col12a1Q60847 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC15.13■□□□□ 0.01
Col12a1Q60847 Gm15198-201ENSMUST00000117283 177 ntBASIC15.13■□□□□ 0.01
Col12a1Q60847 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Col12a1Q60847 Gm7286-201ENSMUST00000182691 1007 ntBASIC15.13■□□□□ 0.01
Col12a1Q60847 Gm27920-201ENSMUST00000183953 96 ntBASIC15.13■□□□□ 0.01
Col12a1Q60847 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Col12a1Q60847 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col12a1Q60847 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col12a1Q60847 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col12a1Q60847 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
Col12a1Q60847 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Col12a1Q60847 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col12a1Q60847 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Col12a1Q60847 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
Col12a1Q60847 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC15.12■□□□□ 0.01
Col12a1Q60847 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC15.12■□□□□ 0.01
Col12a1Q60847 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC15.12■□□□□ 0.01
Col12a1Q60847 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC15.12■□□□□ 0.01
Col12a1Q60847 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col12a1Q60847 Gm45293-201ENSMUST00000209754 1812 ntBASIC15.12■□□□□ 0.01
Col12a1Q60847 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col12a1Q60847 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col12a1Q60847 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Col12a1Q60847 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Col12a1Q60847 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Col12a1Q60847 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col12a1Q60847 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Col12a1Q60847 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Col12a1Q60847 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Col12a1Q60847 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Col12a1Q60847 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC15.12■□□□□ 0.01
Col12a1Q60847 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC15.12■□□□□ 0.01
Col12a1Q60847 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
Col12a1Q60847 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col12a1Q60847 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col12a1Q60847 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col12a1Q60847 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC15.12■□□□□ 0.01
Col12a1Q60847 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col12a1Q60847 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC15.12■□□□□ 0.01
Col12a1Q60847 Ighv8-7-201ENSMUST00000194349 297 ntBASIC15.12■□□□□ 0.01
Col12a1Q60847 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col12a1Q60847 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Col12a1Q60847 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Col12a1Q60847 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC15.11■□□□□ 0.01
Col12a1Q60847 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col12a1Q60847 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC15.11■□□□□ 0.01
Col12a1Q60847 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Col12a1Q60847 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col12a1Q60847 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col12a1Q60847 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC15.11■□□□□ 0.01
Col12a1Q60847 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC15.11■□□□□ 0.01
Col12a1Q60847 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC15.11■□□□□ 0.01
Col12a1Q60847 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Col12a1Q60847 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col12a1Q60847 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col12a1Q60847 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC15.11■□□□□ 0.01
Col12a1Q60847 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC15.1■□□□□ 0.01
Col12a1Q60847 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC15.1■□□□□ 0.01
Col12a1Q60847 Gm4875-201ENSMUST00000118257 786 ntBASIC15.1■□□□□ 0.01
Col12a1Q60847 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC15.1■□□□□ 0.01
Col12a1Q60847 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC15.1■□□□□ 0.01
Col12a1Q60847 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col12a1Q60847 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col12a1Q60847 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col12a1Q60847 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Col12a1Q60847 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col12a1Q60847 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC15.1■□□□□ 0.01
Col12a1Q60847 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Col12a1Q60847 Gm5303-201ENSMUST00000117943 1252 ntBASIC15.1■□□□□ 0.01
Col12a1Q60847 Gm43179-201ENSMUST00000198797 275 ntBASIC15.1■□□□□ 0.01
Col12a1Q60847 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col12a1Q60847 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Col12a1Q60847 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.1■□□□□ 0.01
Col12a1Q60847 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Col12a1Q60847 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Col12a1Q60847 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC15.1■□□□□ 0.01
Col12a1Q60847 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Col12a1Q60847 Gm12960-201ENSMUST00000120017 1066 ntBASIC15.1■□□□□ 0.01
Col12a1Q60847 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC15.1■□□□□ 0.01
Col12a1Q60847 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col12a1Q60847 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC15.1■□□□□ 0.01
Col12a1Q60847 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms