Protein–RNA interactions for Protein: Q5R1I3

Trav7-2, T cell receptor alpha variable 7-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-2Q5R1I3 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav7-2Q5R1I3 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav7-2Q5R1I3 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC11.57□□□□□ -0.56
Trav7-2Q5R1I3 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav7-2Q5R1I3 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav7-2Q5R1I3 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Trav7-2Q5R1I3 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav7-2Q5R1I3 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC11.57□□□□□ -0.56
Trav7-2Q5R1I3 Asic1-205ENSMUST00000228185 1818 ntBASIC11.57□□□□□ -0.56
Trav7-2Q5R1I3 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav7-2Q5R1I3 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav7-2Q5R1I3 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav7-2Q5R1I3 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav7-2Q5R1I3 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav7-2Q5R1I3 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav7-2Q5R1I3 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav7-2Q5R1I3 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC11.57□□□□□ -0.56
Trav7-2Q5R1I3 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav7-2Q5R1I3 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav7-2Q5R1I3 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav7-2Q5R1I3 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Trav7-2Q5R1I3 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav7-2Q5R1I3 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav7-2Q5R1I3 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC11.56□□□□□ -0.56
Trav7-2Q5R1I3 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav7-2Q5R1I3 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav7-2Q5R1I3 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav7-2Q5R1I3 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
Trav7-2Q5R1I3 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC11.56□□□□□ -0.56
Trav7-2Q5R1I3 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Trav7-2Q5R1I3 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav7-2Q5R1I3 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav7-2Q5R1I3 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC11.56□□□□□ -0.56
Trav7-2Q5R1I3 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Trav7-2Q5R1I3 Ccdc166-201ENSMUST00000182172 2584 ntBASIC11.56□□□□□ -0.56
Trav7-2Q5R1I3 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav7-2Q5R1I3 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav7-2Q5R1I3 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Trav7-2Q5R1I3 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav7-2Q5R1I3 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC11.56□□□□□ -0.56
Trav7-2Q5R1I3 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav7-2Q5R1I3 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav7-2Q5R1I3 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav7-2Q5R1I3 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav7-2Q5R1I3 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav7-2Q5R1I3 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC11.56□□□□□ -0.56
Trav7-2Q5R1I3 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Trav7-2Q5R1I3 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav7-2Q5R1I3 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav7-2Q5R1I3 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav7-2Q5R1I3 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav7-2Q5R1I3 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav7-2Q5R1I3 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Trav7-2Q5R1I3 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav7-2Q5R1I3 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav7-2Q5R1I3 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav7-2Q5R1I3 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav7-2Q5R1I3 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav7-2Q5R1I3 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav7-2Q5R1I3 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC11.56□□□□□ -0.56
Trav7-2Q5R1I3 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav7-2Q5R1I3 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav7-2Q5R1I3 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav7-2Q5R1I3 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC11.56□□□□□ -0.56
Trav7-2Q5R1I3 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav7-2Q5R1I3 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav7-2Q5R1I3 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav7-2Q5R1I3 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav7-2Q5R1I3 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC11.56□□□□□ -0.56
Trav7-2Q5R1I3 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav7-2Q5R1I3 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav7-2Q5R1I3 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav7-2Q5R1I3 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav7-2Q5R1I3 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav7-2Q5R1I3 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav7-2Q5R1I3 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav7-2Q5R1I3 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav7-2Q5R1I3 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC11.55□□□□□ -0.56
Trav7-2Q5R1I3 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Trav7-2Q5R1I3 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav7-2Q5R1I3 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav7-2Q5R1I3 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav7-2Q5R1I3 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav7-2Q5R1I3 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC11.55□□□□□ -0.56
Trav7-2Q5R1I3 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav7-2Q5R1I3 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav7-2Q5R1I3 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav7-2Q5R1I3 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
Trav7-2Q5R1I3 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav7-2Q5R1I3 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav7-2Q5R1I3 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav7-2Q5R1I3 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Trav7-2Q5R1I3 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC11.55□□□□□ -0.56
Trav7-2Q5R1I3 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav7-2Q5R1I3 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav7-2Q5R1I3 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC11.55□□□□□ -0.56
Trav7-2Q5R1I3 Gm7977-201ENSMUST00000193787 748 ntBASIC11.55□□□□□ -0.56
Trav7-2Q5R1I3 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC11.55□□□□□ -0.56
Trav7-2Q5R1I3 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav7-2Q5R1I3 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms