Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav8d-1Q5R1H8 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC12.74□□□□□ -0.37
Trav8d-1Q5R1H8 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav8d-1Q5R1H8 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav8d-1Q5R1H8 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav8d-1Q5R1H8 Gm37728-201ENSMUST00000195025 2292 ntBASIC12.74□□□□□ -0.37
Trav8d-1Q5R1H8 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav8d-1Q5R1H8 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav8d-1Q5R1H8 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trav8d-1Q5R1H8 Rbfox2-206ENSMUST00000227314 1810 ntBASIC12.74□□□□□ -0.37
Trav8d-1Q5R1H8 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav8d-1Q5R1H8 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC12.73□□□□□ -0.37
Trav8d-1Q5R1H8 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav8d-1Q5R1H8 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav8d-1Q5R1H8 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav8d-1Q5R1H8 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav8d-1Q5R1H8 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav8d-1Q5R1H8 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav8d-1Q5R1H8 Gm7977-201ENSMUST00000193787 748 ntBASIC12.73□□□□□ -0.37
Trav8d-1Q5R1H8 AC122351.1-201ENSMUST00000220467 126 ntBASIC12.73□□□□□ -0.37
Trav8d-1Q5R1H8 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav8d-1Q5R1H8 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC12.73□□□□□ -0.37
Trav8d-1Q5R1H8 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav8d-1Q5R1H8 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Trav8d-1Q5R1H8 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav8d-1Q5R1H8 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trav8d-1Q5R1H8 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav8d-1Q5R1H8 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav8d-1Q5R1H8 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav8d-1Q5R1H8 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav8d-1Q5R1H8 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav8d-1Q5R1H8 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav8d-1Q5R1H8 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav8d-1Q5R1H8 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav8d-1Q5R1H8 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav8d-1Q5R1H8 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav8d-1Q5R1H8 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav8d-1Q5R1H8 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav8d-1Q5R1H8 Gm37912-201ENSMUST00000191895 3076 ntBASIC12.73□□□□□ -0.37
Trav8d-1Q5R1H8 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav8d-1Q5R1H8 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav8d-1Q5R1H8 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav8d-1Q5R1H8 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav8d-1Q5R1H8 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav8d-1Q5R1H8 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav8d-1Q5R1H8 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trav8d-1Q5R1H8 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav8d-1Q5R1H8 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trav8d-1Q5R1H8 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC12.72□□□□□ -0.37
Trav8d-1Q5R1H8 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav8d-1Q5R1H8 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav8d-1Q5R1H8 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav8d-1Q5R1H8 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trav8d-1Q5R1H8 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Trav8d-1Q5R1H8 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav8d-1Q5R1H8 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC12.72□□□□□ -0.37
Trav8d-1Q5R1H8 Gm21559-201ENSMUST00000220638 855 ntBASIC12.72□□□□□ -0.37
Trav8d-1Q5R1H8 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav8d-1Q5R1H8 Gm8587-201ENSMUST00000076538 843 ntBASIC12.72□□□□□ -0.37
Trav8d-1Q5R1H8 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav8d-1Q5R1H8 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav8d-1Q5R1H8 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav8d-1Q5R1H8 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav8d-1Q5R1H8 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav8d-1Q5R1H8 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav8d-1Q5R1H8 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav8d-1Q5R1H8 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav8d-1Q5R1H8 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav8d-1Q5R1H8 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Trav8d-1Q5R1H8 Actl10-202ENSMUST00000226583 1501 ntBASIC12.72□□□□□ -0.37
Trav8d-1Q5R1H8 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav8d-1Q5R1H8 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav8d-1Q5R1H8 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Trav8d-1Q5R1H8 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trav8d-1Q5R1H8 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav8d-1Q5R1H8 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav8d-1Q5R1H8 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav8d-1Q5R1H8 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav8d-1Q5R1H8 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav8d-1Q5R1H8 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav8d-1Q5R1H8 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav8d-1Q5R1H8 Slc35b2-202ENSMUST00000223987 1766 ntBASIC12.71□□□□□ -0.37
Trav8d-1Q5R1H8 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav8d-1Q5R1H8 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav8d-1Q5R1H8 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Trav8d-1Q5R1H8 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav8d-1Q5R1H8 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC12.71□□□□□ -0.37
Trav8d-1Q5R1H8 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav8d-1Q5R1H8 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.37
Trav8d-1Q5R1H8 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav8d-1Q5R1H8 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav8d-1Q5R1H8 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC12.71□□□□□ -0.37
Trav8d-1Q5R1H8 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Trav8d-1Q5R1H8 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav8d-1Q5R1H8 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav8d-1Q5R1H8 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Trav8d-1Q5R1H8 Gm26039-201ENSMUST00000158152 144 ntBASIC12.71□□□□□ -0.37
Trav8d-1Q5R1H8 Gm25016-201ENSMUST00000158399 131 ntBASIC12.71□□□□□ -0.37
Trav8d-1Q5R1H8 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav8d-1Q5R1H8 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms