Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC12.08□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC12.08□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC12.08□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Gm5357-201ENSMUST00000212720 1924 ntBASIC12.07□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC12.07□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Gm20760-201ENSMUST00000179197 648 ntBASIC12.07□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Gm3272-201ENSMUST00000181181 1229 ntBASIC12.07□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Mir6404-201ENSMUST00000183699 94 ntBASIC12.07□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Gm37912-201ENSMUST00000191895 3076 ntBASIC12.07□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Gm9889-202ENSMUST00000206983 1577 ntBASIC12.07□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Gm10566-201ENSMUST00000086739 996 ntBASIC12.07□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Gm37728-201ENSMUST00000195025 2292 ntBASIC12.07□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC12.06□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC12.06□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC12.06□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC12.06□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC12.06□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms