Protein–RNA interactions for Protein: Q4U2R1

Herc2, E3 ubiquitin-protein ligase HERC2, mousemouse

Predictions only

Length 4,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc2Q4U2R1 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Herc2Q4U2R1 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Herc2Q4U2R1 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Herc2Q4U2R1 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Herc2Q4U2R1 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Herc2Q4U2R1 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Herc2Q4U2R1 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Herc2Q4U2R1 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Herc2Q4U2R1 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Herc2Q4U2R1 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Herc2Q4U2R1 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Herc2Q4U2R1 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Herc2Q4U2R1 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Herc2Q4U2R1 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Herc2Q4U2R1 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC9.07□□□□□ -0.96
Herc2Q4U2R1 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Herc2Q4U2R1 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Herc2Q4U2R1 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC9.06□□□□□ -0.96
Herc2Q4U2R1 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC9.06□□□□□ -0.96
Herc2Q4U2R1 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Herc2Q4U2R1 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC9.06□□□□□ -0.96
Herc2Q4U2R1 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Herc2Q4U2R1 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Herc2Q4U2R1 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Herc2Q4U2R1 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Herc2Q4U2R1 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Herc2Q4U2R1 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC9.06□□□□□ -0.96
Herc2Q4U2R1 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC9.06□□□□□ -0.96
Herc2Q4U2R1 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Herc2Q4U2R1 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC9.06□□□□□ -0.96
Herc2Q4U2R1 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Herc2Q4U2R1 Gm5354-201ENSMUST00000182417 973 ntBASIC9.06□□□□□ -0.96
Herc2Q4U2R1 Gm43947-201ENSMUST00000203019 959 ntBASIC9.06□□□□□ -0.96
Herc2Q4U2R1 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Herc2Q4U2R1 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Herc2Q4U2R1 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Herc2Q4U2R1 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Herc2Q4U2R1 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Herc2Q4U2R1 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Herc2Q4U2R1 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Herc2Q4U2R1 Gm27341-201ENSMUST00000183570 106 ntBASIC9.06□□□□□ -0.96
Herc2Q4U2R1 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC9.06□□□□□ -0.96
Herc2Q4U2R1 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Herc2Q4U2R1 Gm6627-201ENSMUST00000218299 2386 ntBASIC9.06□□□□□ -0.96
Herc2Q4U2R1 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Herc2Q4U2R1 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Herc2Q4U2R1 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Herc2Q4U2R1 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Herc2Q4U2R1 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC9.06□□□□□ -0.96
Herc2Q4U2R1 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Herc2Q4U2R1 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Herc2Q4U2R1 Gm13342-201ENSMUST00000121055 207 ntBASIC9.06□□□□□ -0.96
Herc2Q4U2R1 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC9.06□□□□□ -0.96
Herc2Q4U2R1 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Herc2Q4U2R1 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Herc2Q4U2R1 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC9.06□□□□□ -0.96
Herc2Q4U2R1 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC9.06□□□□□ -0.96
Herc2Q4U2R1 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Herc2Q4U2R1 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Herc2Q4U2R1 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Herc2Q4U2R1 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Herc2Q4U2R1 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC9.05□□□□□ -0.96
Herc2Q4U2R1 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC9.05□□□□□ -0.96
Herc2Q4U2R1 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC9.05□□□□□ -0.96
Herc2Q4U2R1 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
Herc2Q4U2R1 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Herc2Q4U2R1 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Herc2Q4U2R1 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC9.05□□□□□ -0.96
Herc2Q4U2R1 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
Herc2Q4U2R1 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Herc2Q4U2R1 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Herc2Q4U2R1 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Herc2Q4U2R1 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Herc2Q4U2R1 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Herc2Q4U2R1 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Herc2Q4U2R1 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Herc2Q4U2R1 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC9.05□□□□□ -0.96
Herc2Q4U2R1 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC9.05□□□□□ -0.96
Herc2Q4U2R1 B9d1os-201ENSMUST00000137010 674 ntBASIC9.05□□□□□ -0.96
Herc2Q4U2R1 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Herc2Q4U2R1 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Herc2Q4U2R1 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Herc2Q4U2R1 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Herc2Q4U2R1 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Herc2Q4U2R1 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC9.05□□□□□ -0.96
Herc2Q4U2R1 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC9.05□□□□□ -0.96
Herc2Q4U2R1 Gm43118-201ENSMUST00000199149 775 ntBASIC9.05□□□□□ -0.96
Herc2Q4U2R1 Gm18307-201ENSMUST00000206864 949 ntBASIC9.05□□□□□ -0.96
Herc2Q4U2R1 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
Herc2Q4U2R1 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Herc2Q4U2R1 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Herc2Q4U2R1 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Herc2Q4U2R1 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC9.05□□□□□ -0.96
Herc2Q4U2R1 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Herc2Q4U2R1 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Herc2Q4U2R1 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Herc2Q4U2R1 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC9.04□□□□□ -0.96
Herc2Q4U2R1 AC123834.2-201ENSMUST00000224038 2340 ntBASIC9.04□□□□□ -0.96
Herc2Q4U2R1 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Herc2Q4U2R1 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms